HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:23.0 nTPM
HPA:23.0 nTPM
GTEx:13.5 nTPM
FANTOM5:31.0 Scaled Tags Per Million
Pig:22.7 nTPM
Mouse:79.8 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.0
Sample id Sample description nTPM
Hippocampus
nTPM: 12.2
2148 Female, age 91, left hemisphere 15.7
2621 Female, age 67, right hemisphere 15.1
1898 Male, age 80, left hemisphere 14.6
1855 Male, age 76, left hemisphere 11.7
2529 Female, age 94, left hemisphere 8.5
1911 Female, age 85, right hemisphere 7.6
Dentate gyrus
nTPM: 14.5
2530 Female, age 94, left hemisphere 18.8
2531 Female, age 67, both hemispheres 16.9
1927 Female, age 91, both hemispheres 15.0
2010 Male, age 76, both hemispheres 13.5
2246 Female, age 85, both hemispheres 11.6
2528 Male, age 74, both hemispheres 11.1
Entorhinal gyrus
nTPM: 22.0
2613 Female, age 94, left hemisphere 28.3
2764 Male, age 80, right hemisphere 24.6
2686 Male, age 75, right hemisphere 21.1
1787 Male, age 76, left hemisphere 20.8
1938 Female, age 85, left hemisphere 19.8
2117 Female, age 91, right hemisphere 17.2
Hippocampus, CA1
nTPM: 10.8
1873 Female, age 85, both hemispheres 12.4
2045 Male, age 76, both hemispheres 12.1
2082 Female, age 91, right hemisphere 11.4
2749 Male, age 80, left hemisphere 10.3
2527 Male, age 74, both hemispheres 8.0
Hippocampus, CA2
nTPM: 14.4
1892 Male, age 76, both hemispheres 20.2
1963 Male, age 80, left hemisphere 17.4
1940 Female, age 85, left hemisphere 17.1
2437 Female, age 94, left hemisphere 12.2
2113 Female, age 91, right hemisphere 11.3
2249 Male, age 74, both hemispheres 8.1
Hippocampus, CA3
nTPM: 12.5
2620 Female, age 94, left hemisphere 24.4
2861 Female, age 67, both hemispheres 16.3
1867 Male, age 76, both hemispheres 11.3
1891 Female, age 85, both hemispheres 11.0
2137 Male, age 80, left hemisphere 7.5
2436 Male, age 74, both hemispheres 4.7
Parahippocampal cortex
nTPM: 18.3
2532 Female, age 72, left hemisphere 24.7
1850 Male, age 80, both hemispheres 24.0
2693 Female, age 94, both hemispheres 22.8
2622 Female, age 67, right hemisphere 20.6
1990 Female, age 91, right hemisphere 19.4
1933 Female, age 85, both hemispheres 17.9
2692 Male, age 74, both hemispheres 16.0
2245 Female, age 91, both hemispheres 13.8
2018 Male, age 76, both hemispheres 12.7
2250 Female, age 67, right hemisphere 11.4
Perirhinal gyrus
nTPM: 23.0
1794 Male, age 80, right hemisphere 26.5
1841 Female, age 85, right hemisphere 23.0
2521 Female, age 94, right hemisphere 22.9
2848 Male, age 76, right hemisphere 21.4
1847 Female, age 91, left hemisphere 21.2
Subiculum
nTPM: 12.5
1977 Female, age 85, both hemispheres 17.0
2619 Male, age 74, both hemispheres 13.3
1901 Male, age 80, both hemispheres 11.7
2729 Female, age 91, right hemisphere 11.3
2438 Female, age 94, left hemisphere 11.2
2042 Male, age 76, both hemispheres 10.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.5
Samples: 197

Max nTPM: 48.4
Min nTPM: 2.4
Std nTPM: 7.0
Median nTPM: 12.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 48.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 43.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 39.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 34.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 30.6
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 28.4
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 28.0
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 26.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 26.3
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 25.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 24.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.0
FF:10169-103B7 60 years, female 31.3
FF:10153-102I9 76 years, female 30.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.0
Samples: 4

Max nTPM: 26.5
Min nTPM: 15.6
Sample A Female 26.5
Sample B Female 20.7
Sample C Male 21.0
Sample D Male 15.6
Entorhinal cortex
nTPM: 22.8
Samples: 4

Max nTPM: 24.7
Min nTPM: 21.4
Sample A Female 21.4
Sample B Female 24.7
Sample C Male 23.5
Sample D Male 21.4
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 23.3
Min nTPM: 12.5
Sample A Female 23.3
Sample B Female 15.1
Sample C Male 13.7
Sample D Male 12.5
Ventral hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 20.8
Min nTPM: 11.7
Sample A Female 17.0
Sample B Female 11.7
Sample C Male 20.8
Sample D Male 20.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 79.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.8
Samples: 4

Max nTPM: 84.9
Min nTPM: 69.1
Sample A Male 81.3
Sample B Male 84.9
Sample C Female 69.1
Sample D Female 83.9
Hippocampal formation
nTPM: 62.4
Samples: 4

Max nTPM: 67.0
Min nTPM: 57.6
Sample A Male 67.0
Sample B Male 62.0
Sample C Female 63.1
Sample D Female 57.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
69444855 Antisense, RP_050414_04_G06, Mouse strain C57BL/6J (56 days, male) 6.1
72128774 Antisense, RP_051017_04_D02, Mouse strain C57BL/6J (56 days, male) 1.8

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