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U2AF1
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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:38.3 nTPM
HPA:38.3 nTPM
GTEx:50.9 nTPM
FANTOM5:7.9 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 38.3
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 35.9
2565 Male, age 75, midline 41.2
2048 Male, age 55, midline 36.0
2194 Female, age 79, both hemispheres 35.3
2816 Male, age 47, midline 34.9
1981 Female, age 72, midline 32.0
Cervical spinal cord, dorsal horn
nTPM: 38.0
2721 Male, age 90, both hemispheres 39.7
1877 Male, age 55, unknown 39.0
2173 Female, age 72, unknown 38.5
2296 Male, age 66, both hemispheres 38.1
2297 Male, age 75, both hemispheres 37.1
2069 Male, age 47, both hemispheres 35.6
Cervical spinal cord, ventral horn
nTPM: 38.3
2098 Female, age 72, unknown 43.0
2809 Male, age 90, both hemispheres 40.2
2295 Male, age 66, both hemispheres 39.3
2068 Male, age 55, unknown 37.2
2820 Female, age 79, both hemispheres 35.8
2480 Male, age 75, both hemispheres 34.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 50.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 50.9
Samples: 159

Max nTPM: 103.2
Min nTPM: 21.6
Std nTPM: 14.6
Median nTPM: 49.0
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 103.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 101.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 94.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 92.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 88.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 84.1
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 80.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 77.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 77.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 76.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 75.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 74.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 73.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 71.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 68.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 68.3
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 67.6
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 67.5
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 66.9
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 66.2
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 64.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 63.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 63.3
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 63.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 62.9
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 62.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 62.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 62.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 62.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 61.6
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 61.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 61.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 61.1
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 60.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 60.4
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 60.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 60.3
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 59.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 59.4
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 59.3
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 59.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 57.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 57.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 56.8
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 56.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 56.2
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 55.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 55.4
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 55.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 55.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 54.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 54.9
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 54.6
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 54.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 53.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 53.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 53.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 53.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 52.9
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 52.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 52.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 52.4
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 52.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 52.3
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 51.8
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 51.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 51.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 51.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 50.9
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 50.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 50.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 50.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 50.1
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 49.9
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 49.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 49.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 49.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 49.4
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 49.1
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 49.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 49.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 49.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 49.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 48.9
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 48.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 48.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 48.6
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 48.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 48.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 48.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 47.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 47.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 47.6
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 47.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 46.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 46.9
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 46.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 46.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 46.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 45.9
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 45.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 45.7
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 45.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 45.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 45.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 45.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 44.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 44.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 44.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 44.3
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 43.7
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 43.6
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 43.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 43.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 43.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 42.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 42.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 41.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 41.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 41.6
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 41.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 41.5
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 41.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 41.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 40.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 40.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 40.2
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 39.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 38.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 38.3
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 38.1
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 37.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 37.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 37.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 36.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 36.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 36.2
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 35.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 34.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 34.2
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 34.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 33.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 33.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 33.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 33.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 32.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 32.3
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 31.6
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 31.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 30.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 30.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 30.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 27.6
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 27.6
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 26.3
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 26.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 25.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 24.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 21.6
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 7.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 7.9
FF:10159-103A6 76 years, female 12.0
FF:10181-103D1 60 years, female 3.8

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