HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:62.5 nTPM
HPA:62.5 nTPM
GTEx:45.7 nTPM
FANTOM5:129.2 Scaled Tags Per Million
Pig:37.1 nTPM
Mouse:65.4 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030196Antibody HPA030197Antibody HPA030198Antibody CAB033918
Glial cells MediumNot detectedNot detectedNot detected
Neuronal cells MediumNot detectedNot detectedNot detected








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.5
Sample id Sample description nTPM
Hippocampus
nTPM: 51.8
2621 Female, age 67, right hemisphere 62.3
2529 Female, age 94, left hemisphere 55.7
2148 Female, age 91, left hemisphere 54.5
1898 Male, age 80, left hemisphere 50.9
1911 Female, age 85, right hemisphere 47.6
1855 Male, age 76, left hemisphere 39.9
Dentate gyrus
nTPM: 52.0
1927 Female, age 91, both hemispheres 61.4
2531 Female, age 67, both hemispheres 59.6
2530 Female, age 94, left hemisphere 54.7
2528 Male, age 74, both hemispheres 54.4
2246 Female, age 85, both hemispheres 43.6
2010 Male, age 76, both hemispheres 38.4
Entorhinal gyrus
nTPM: 62.5
2686 Male, age 75, right hemisphere 84.1
2613 Female, age 94, left hemisphere 71.0
2764 Male, age 80, right hemisphere 59.5
1938 Female, age 85, left hemisphere 58.1
1787 Male, age 76, left hemisphere 51.9
2117 Female, age 91, right hemisphere 50.5
Hippocampus, CA1
nTPM: 50.5
2527 Male, age 74, both hemispheres 64.7
2749 Male, age 80, left hemisphere 54.3
2082 Female, age 91, right hemisphere 50.2
1873 Female, age 85, both hemispheres 49.0
2045 Male, age 76, both hemispheres 34.5
Hippocampus, CA2
nTPM: 57.0
1963 Male, age 80, left hemisphere 86.0
2437 Female, age 94, left hemisphere 61.5
1892 Male, age 76, both hemispheres 58.7
2113 Female, age 91, right hemisphere 51.9
1940 Female, age 85, left hemisphere 45.3
2249 Male, age 74, both hemispheres 38.7
Hippocampus, CA3
nTPM: 56.4
2861 Female, age 67, both hemispheres 79.3
2620 Female, age 94, left hemisphere 60.6
2137 Male, age 80, left hemisphere 59.7
1867 Male, age 76, both hemispheres 48.9
1891 Female, age 85, both hemispheres 46.6
2436 Male, age 74, both hemispheres 43.2
Parahippocampal cortex
nTPM: 58.4
2622 Female, age 67, right hemisphere 81.1
2692 Male, age 74, both hemispheres 69.2
2693 Female, age 94, both hemispheres 60.4
1933 Female, age 85, both hemispheres 57.1
2245 Female, age 91, both hemispheres 56.3
2250 Female, age 67, right hemisphere 55.8
1990 Female, age 91, right hemisphere 53.9
1850 Male, age 80, both hemispheres 53.6
2532 Female, age 72, left hemisphere 51.3
2018 Male, age 76, both hemispheres 45.0
Perirhinal gyrus
nTPM: 57.0
1847 Female, age 91, left hemisphere 62.4
1794 Male, age 80, right hemisphere 59.1
1841 Female, age 85, right hemisphere 57.4
2521 Female, age 94, right hemisphere 54.1
2848 Male, age 76, right hemisphere 51.9
Subiculum
nTPM: 47.6
2619 Male, age 74, both hemispheres 69.2
1977 Female, age 85, both hemispheres 52.0
2438 Female, age 94, left hemisphere 46.4
2729 Female, age 91, right hemisphere 45.9
1901 Male, age 80, both hemispheres 41.2
2042 Male, age 76, both hemispheres 30.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.7
Samples: 197

Max nTPM: 121.1
Min nTPM: 14.2
Std nTPM: 16.9
Median nTPM: 44.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 121.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 88.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 85.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 83.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 82.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 82.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 82.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 80.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 78.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 78.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 77.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 129.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 129.2
FF:10169-103B7 60 years, female 133.9
FF:10153-102I9 76 years, female 124.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.1
Samples: 4

Max nTPM: 24.2
Min nTPM: 16.1
Sample A Female 24.2
Sample B Female 20.0
Sample C Male 19.9
Sample D Male 16.1
Entorhinal cortex
nTPM: 37.1
Samples: 4

Max nTPM: 43.1
Min nTPM: 32.4
Sample A Female 39.4
Sample B Female 32.4
Sample C Male 43.1
Sample D Male 33.5
Subiculum
nTPM: 35.0
Samples: 4

Max nTPM: 51.4
Min nTPM: 26.3
Sample A Female 51.4
Sample B Female 29.5
Sample C Male 32.7
Sample D Male 26.3
Ventral hippocampus
nTPM: 27.5
Samples: 4

Max nTPM: 40.6
Min nTPM: 20.0
Sample A Female 27.4
Sample B Female 21.9
Sample C Male 40.6
Sample D Male 20.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.4
Samples: 4

Max nTPM: 74.6
Min nTPM: 59.4
Sample A Male 64.1
Sample B Male 59.4
Sample C Female 63.6
Sample D Female 74.6
Hippocampal formation
nTPM: 49.0
Samples: 4

Max nTPM: 52.2
Min nTPM: 45.0
Sample A Male 47.3
Sample B Male 45.0
Sample C Female 52.2
Sample D Female 51.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
68445997 Antisense, RP_050113_01_D01, Mouse strain C57BL/6J (56 days, male) 20.6
70919322 Antisense, RP_050713_01_B02, Mouse strain C57BL/6J (56 days, male) 4.1
70723670 Antisense, RP_050705_01_E12, Mouse strain C57BL/6J (56 days, male) 0.6
73512188 Antisense, RP_050705_01_E12, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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