COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: High
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:18.5 nTPM
HPA:2.4 nTPM
GTEx:18.5 nTPM
FANTOM5:5.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA042199Antibody HPA060736
Endothelial cells MediumNot detected
Glandular cells HighHigh
Peripheral nerve/ganglion -Medium



COLON - HPA RNA-seqi
Average nTPM 2.4
overview
Male, age 54 		Colon sample 67
nTPM: 3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 2.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 1.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 3.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 3.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 0.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 1.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 2.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 1.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 1.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 3.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 4.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 18.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 18.5
Samples: 373

Max nTPM: 44.1
Min nTPM: 3.2
Std nTPM: 7.2
Median nTPM: 17.0
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 44.1
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 39.3
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 39.0
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 38.9
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 36.7
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 36.2
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 35.9
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 35.8
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 35.3
GTEX-15ER7-2826-SM-6PAN2 20-29 years, female 34.8
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 34.7
Show allShow less
Colon - Transverse
Average nTPM: 11.7
Samples: 406

Max nTPM: 36.1
Min nTPM: 2.1
Std nTPM: 6.6
Median nTPM: 10.9
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 36.1
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 34.9
GTEX-14BIN-3026-SM-5ZZUS 50-59 years, female 33.2
GTEX-16Z82-2226-SM-6LPJ7 60-69 years, male 30.1
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 30.0
GTEX-1E2YA-2626-SM-7MGWW 50-59 years, male 29.1
GTEX-1IGQW-2326-SM-CE6RV 60-69 years, male 28.8
GTEX-17JCI-2626-SM-7EWE6 60-69 years, female 28.7
GTEX-1GZ4I-2426-SM-9WPPP 50-59 years, male 27.7
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 27.2
GTEX-1QMI2-2626-SM-E6CR4 60-69 years, male 26.4
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 5.5
FF:10014-101C5 62,83,84 years, mixed 5.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.