HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.8 nTPM
HPA:22.8 nTPM
GTEx:18.5 nTPM
FANTOM5:10.1 Scaled Tags Per Million
Pig:28.5 nTPM
Mouse:42.2 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007002
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.8
Sample id Sample description nTPM
Hippocampus
nTPM: 20.9
1898 Male, age 80, left hemisphere 22.5
2148 Female, age 91, left hemisphere 21.7
1855 Male, age 76, left hemisphere 20.9
1911 Female, age 85, right hemisphere 20.9
2621 Female, age 67, right hemisphere 20.2
2529 Female, age 94, left hemisphere 19.0
Dentate gyrus
nTPM: 21.9
1927 Female, age 91, both hemispheres 23.4
2531 Female, age 67, both hemispheres 23.4
2246 Female, age 85, both hemispheres 21.8
2010 Male, age 76, both hemispheres 21.5
2528 Male, age 74, both hemispheres 20.8
2530 Female, age 94, left hemisphere 20.6
Entorhinal gyrus
nTPM: 18.8
2764 Male, age 80, right hemisphere 20.1
1787 Male, age 76, left hemisphere 18.9
2613 Female, age 94, left hemisphere 18.8
1938 Female, age 85, left hemisphere 18.5
2686 Male, age 75, right hemisphere 18.4
2117 Female, age 91, right hemisphere 18.3
Hippocampus, CA1
nTPM: 22.8
2045 Male, age 76, both hemispheres 26.8
1873 Female, age 85, both hemispheres 23.1
2749 Male, age 80, left hemisphere 23.1
2082 Female, age 91, right hemisphere 21.0
2527 Male, age 74, both hemispheres 19.8
Hippocampus, CA2
nTPM: 20.2
1892 Male, age 76, both hemispheres 21.8
1963 Male, age 80, left hemisphere 20.7
2249 Male, age 74, both hemispheres 20.0
2113 Female, age 91, right hemisphere 19.7
2437 Female, age 94, left hemisphere 19.5
1940 Female, age 85, left hemisphere 19.4
Hippocampus, CA3
nTPM: 22.6
2620 Female, age 94, left hemisphere 27.5
2137 Male, age 80, left hemisphere 22.3
2861 Female, age 67, both hemispheres 21.7
1867 Male, age 76, both hemispheres 21.4
1891 Female, age 85, both hemispheres 21.4
2436 Male, age 74, both hemispheres 21.1
Parahippocampal cortex
nTPM: 19.4
1850 Male, age 80, both hemispheres 21.8
1933 Female, age 85, both hemispheres 20.3
2693 Female, age 94, both hemispheres 20.2
2018 Male, age 76, both hemispheres 19.9
2245 Female, age 91, both hemispheres 19.2
2250 Female, age 67, right hemisphere 19.0
2532 Female, age 72, left hemisphere 18.8
2622 Female, age 67, right hemisphere 18.6
2692 Male, age 74, both hemispheres 18.2
1990 Female, age 91, right hemisphere 17.7
Perirhinal gyrus
nTPM: 21.2
1794 Male, age 80, right hemisphere 23.3
2848 Male, age 76, right hemisphere 21.6
1841 Female, age 85, right hemisphere 21.4
1847 Female, age 91, left hemisphere 19.8
2521 Female, age 94, right hemisphere 19.8
Subiculum
nTPM: 19.2
2729 Female, age 91, right hemisphere 21.3
1901 Male, age 80, both hemispheres 20.3
1977 Female, age 85, both hemispheres 19.8
2042 Male, age 76, both hemispheres 18.9
2619 Male, age 74, both hemispheres 18.5
2438 Female, age 94, left hemisphere 16.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.5
Samples: 197

Max nTPM: 34.3
Min nTPM: 9.4
Std nTPM: 5.3
Median nTPM: 17.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 34.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 32.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 31.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 30.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 30.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 30.3
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 30.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 29.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 29.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 29.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 29.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.1
FF:10169-103B7 60 years, female 12.5
FF:10153-102I9 76 years, female 7.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.5
Samples: 4

Max nTPM: 33.8
Min nTPM: 22.9
Sample A Female 33.8
Sample B Female 28.5
Sample C Male 22.9
Sample D Male 28.7
Entorhinal cortex
nTPM: 24.5
Samples: 4

Max nTPM: 27.7
Min nTPM: 21.6
Sample A Female 27.7
Sample B Female 24.7
Sample C Male 23.8
Sample D Male 21.6
Subiculum
nTPM: 23.0
Samples: 4

Max nTPM: 25.5
Min nTPM: 20.4
Sample A Female 25.5
Sample B Female 20.4
Sample C Male 24.2
Sample D Male 21.7
Ventral hippocampus
nTPM: 28.4
Samples: 4

Max nTPM: 34.2
Min nTPM: 22.9
Sample A Female 26.1
Sample B Female 22.9
Sample C Male 30.4
Sample D Male 34.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.6
Samples: 4

Max nTPM: 36.5
Min nTPM: 28.3
Sample A Male 30.2
Sample B Male 31.4
Sample C Female 36.5
Sample D Female 28.3
Hippocampal formation
nTPM: 42.2
Samples: 4

Max nTPM: 45.6
Min nTPM: 39.5
Sample A Male 45.6
Sample B Male 39.9
Sample C Female 43.8
Sample D Female 39.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
583857 Antisense, RP_040831_01_B08, Mouse strain C57BL/6J (56 days, male) 1.7

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