We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
FAM189B
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • FAM189B
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:10.6 nTPM
FANTOM5:63.5 Scaled Tags Per Million
Pig:5.0 nTPM

CAUDATE - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA006659
Glial cells Medium
Neuronal cells Medium


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 10.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 10.6
Samples: 246

Max nTPM: 27.0
Min nTPM: 2.8
Std nTPM: 4.0
Median nTPM: 10.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 27.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 22.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 19.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 19.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 18.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 18.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 17.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 17.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 17.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 17.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 17.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 17.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 17.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 17.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 17.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 16.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 16.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 16.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 16.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 16.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 16.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 16.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 16.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 16.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 15.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 15.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 15.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 15.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 15.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 15.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 15.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 15.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 15.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 15.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 15.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 15.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 15.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 15.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 15.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 15.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 15.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 15.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 15.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 14.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 14.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 14.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 14.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 14.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 14.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 14.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 14.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 14.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 14.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 14.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 14.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 14.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 14.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 14.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 14.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 14.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 14.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 13.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 13.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 13.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 13.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 13.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 13.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 13.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 13.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 13.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 13.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 12.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 12.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 12.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 12.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 12.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 12.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 12.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 12.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 12.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 12.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 12.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 12.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 12.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 12.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 11.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 11.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 11.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 11.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 11.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 11.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 11.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 11.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 11.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 11.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 11.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 11.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 11.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 11.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 11.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 11.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 11.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 11.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 11.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 11.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 11.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 10.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 10.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 10.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 10.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 10.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 10.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 10.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 10.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 10.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 10.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 10.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 10.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 10.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 10.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 10.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 10.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 10.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 10.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 10.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 10.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 10.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 10.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 10.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 10.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 10.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 10.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 10.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 9.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 9.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 9.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 9.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 9.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 9.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 9.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 9.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 9.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 9.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 9.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 9.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 9.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 9.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 9.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 9.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 9.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 9.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 9.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 9.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 8.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 8.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 8.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 8.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 8.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 8.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 8.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 8.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 8.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 8.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 8.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 8.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 8.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 8.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 8.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 8.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 8.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 8.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 8.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 8.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 8.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 7.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 7.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 7.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 7.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 7.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 7.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 7.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 7.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 7.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 7.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 7.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 7.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 7.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 7.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 7.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 7.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 7.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 7.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 7.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 7.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 7.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 7.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 7.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 7.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 7.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 6.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 6.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 6.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 6.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 6.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 6.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 6.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 6.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 6.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 6.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 6.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 6.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 6.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 6.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 6.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 6.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 5.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 5.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 5.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 5.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 5.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 5.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 5.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 5.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 5.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 5.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 5.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 5.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 5.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 5.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 5.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 4.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 4.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 4.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 4.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 4.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 4.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 4.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 4.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 4.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 4.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 4.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 3.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 3.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 3.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 3.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 2.8
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 63.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 63.5
FF:10164-103B2 76 years, female 63.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 5.0
Pig sample Sample description nTPM
Caudate
nTPM: 5.0
Samples: 4

Max nTPM: 5.7
Min nTPM: 4.3
Sample A Female 4.3
Sample B Female 4.6
Sample C Male 5.7
Sample D Male 5.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.