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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:217.6 nTPM
GTEx:217.6 nTPM
FANTOM5:270.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA006660Antibody CAB004022
Squamous epithelial cells HighHigh





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 217.6
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 217.6
Samples: 156

Max nTPM: 532.0
Min nTPM: 105.0
Std nTPM: 67.7
Median nTPM: 211.9
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 532.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 528.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 427.2
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 425.4
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 363.0
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 340.8
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 340.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 326.7
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 316.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 315.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 312.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 309.4
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 300.1
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 291.4
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 291.3
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 291.2
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 287.4
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 284.0
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 283.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 278.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 276.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 272.9
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 272.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 269.4
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 268.4
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 267.5
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 265.9
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 265.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 262.8
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 262.1
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 260.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 256.6
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 254.3
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 253.9
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 253.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 252.4
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 250.5
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 249.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 248.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 247.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 246.7
GTEX-QCQG-1226-SM-48U23 50-59 years, female 246.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 243.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 243.5
GTEX-1C475-0526-SM-793AC 40-49 years, female 242.5
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 242.4
GTEX-11I78-2026-SM-5987C 50-59 years, female 242.1
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 238.6
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 238.3
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 237.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 234.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 233.4
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 232.7
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 232.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 232.4
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 231.8
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 231.3
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 230.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 230.1
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 229.6
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 227.8
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 227.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 225.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 225.7
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 225.2
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 224.4
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 221.5
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 220.6
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 219.1
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 218.8
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 218.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 218.7
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 217.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 216.7
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 216.1
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 214.7
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 212.3
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 212.2
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 211.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 210.8
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 210.4
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 209.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 208.6
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 208.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 207.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 207.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 206.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 206.4
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 206.1
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 205.0
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 204.8
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 204.8
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 197.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 197.4
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 195.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 192.5
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 192.0
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 191.7
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 190.1
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 190.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 187.1
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 186.1
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 182.2
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 179.9
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 178.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 178.8
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 177.9
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 176.7
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 175.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 175.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 174.5
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 174.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 174.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 173.7
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 172.8
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 172.8
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 172.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 172.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 172.1
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 171.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 170.8
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 168.6
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 168.5
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 168.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 168.3
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 168.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 167.1
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 163.5
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 160.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 159.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 157.7
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 156.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 153.8
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 153.7
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 153.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 152.9
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 150.8
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 150.3
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 145.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 144.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 140.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 137.1
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 135.0
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 134.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 133.5
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 133.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 131.5
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 131.2
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 126.4
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 124.7
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 124.6
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 121.0
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 114.1
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 113.6
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 109.2
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 105.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 270.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 270.1
FF:10204-103F6 68 years, female 270.1

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