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VPS28
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:124.7 nTPM
FANTOM5:57.1 Scaled Tags Per Million
Pig:22.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA024688Antibody HPA024745
Glial cells MediumMedium
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 124.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 124.7
Samples: 246

Max nTPM: 215.3
Min nTPM: 67.4
Std nTPM: 26.2
Median nTPM: 120.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 215.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 214.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 205.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 201.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 199.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 198.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 196.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 196.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 190.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 184.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 179.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 177.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 177.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 176.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 174.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 174.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 172.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 170.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 166.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 163.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 161.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 161.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 160.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 158.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 157.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 157.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 155.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 153.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 152.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 152.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 151.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 151.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 151.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 151.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 150.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 149.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 148.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 148.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 147.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 147.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 146.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 146.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 144.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 144.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 143.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 143.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 143.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 142.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 142.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 141.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 140.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 140.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 140.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 140.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 140.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 139.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 139.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 139.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 139.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 138.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 137.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 137.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 137.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 137.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 136.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 136.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 136.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 135.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 135.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 135.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 134.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 134.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 134.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 134.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 134.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 134.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 133.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 133.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 133.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 133.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 131.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 131.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 131.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 130.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 130.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 130.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 130.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 129.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 129.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 129.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 129.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 128.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 128.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 128.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 128.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 127.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 127.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 127.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 127.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 127.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 127.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 127.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 126.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 126.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 125.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 125.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 125.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 124.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 124.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 123.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 122.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 122.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 122.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 122.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 122.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 122.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 121.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 121.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 121.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 121.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 121.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 120.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 120.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 120.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 120.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 120.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 119.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 119.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 119.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 118.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 117.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 117.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 117.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 116.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 116.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 116.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 116.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 115.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 115.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 115.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 115.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 114.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 114.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 114.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 114.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 114.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 114.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 114.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 113.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 113.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 113.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 112.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 112.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 112.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 112.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 112.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 112.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 111.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 111.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 111.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 111.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 111.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 111.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 110.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 110.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 110.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 110.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 110.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 110.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 110.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 110.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 109.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 109.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 109.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 109.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 108.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 108.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 108.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 108.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 108.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 107.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 107.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 107.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 107.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 106.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 106.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 106.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 106.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 106.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 106.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 105.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 105.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 105.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 105.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 105.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 105.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 104.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 104.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 104.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 103.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 103.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 103.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 103.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 103.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 103.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 102.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 102.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 101.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 101.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 100.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 100.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 100.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 99.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 99.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 99.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 99.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 98.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 98.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 98.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 98.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 97.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 97.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 97.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 97.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 97.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 96.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 95.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 93.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 92.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 92.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 92.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 91.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 91.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 91.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 88.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 87.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 85.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 84.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 83.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 83.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 82.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 82.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 81.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 79.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 76.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 67.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 57.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 57.1
FF:10164-103B2 76 years, female 57.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 22.2
Pig sample Sample description nTPM
Caudate
nTPM: 22.2
Samples: 4

Max nTPM: 25.6
Min nTPM: 18.8
Sample A Female 19.5
Sample B Female 24.9
Sample C Male 25.6
Sample D Male 18.8

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