HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:163.8 nTPM
HPA:163.8 nTPM
GTEx:139.0 nTPM
FANTOM5:166.2 Scaled Tags Per Million
Pig:115.9 nTPM
Mouse:309.6 nTPM
Allen mouse:28.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068843Antibody CAB004587
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 163.8
Sample id Sample description nTPM
Hippocampus
nTPM: 160.6
2529 Female, age 94, left hemisphere 191.5
1898 Male, age 80, left hemisphere 172.4
1855 Male, age 76, left hemisphere 160.1
2148 Female, age 91, left hemisphere 148.3
2621 Female, age 67, right hemisphere 146.3
1911 Female, age 85, right hemisphere 145.2
Dentate gyrus
nTPM: 160.9
2010 Male, age 76, both hemispheres 204.1
2530 Female, age 94, left hemisphere 167.1
2528 Male, age 74, both hemispheres 165.9
1927 Female, age 91, both hemispheres 147.2
2246 Female, age 85, both hemispheres 144.8
2531 Female, age 67, both hemispheres 136.4
Entorhinal gyrus
nTPM: 161.5
2117 Female, age 91, right hemisphere 179.5
2764 Male, age 80, right hemisphere 179.2
1787 Male, age 76, left hemisphere 167.9
1938 Female, age 85, left hemisphere 160.8
2686 Male, age 75, right hemisphere 146.5
2613 Female, age 94, left hemisphere 135.3
Hippocampus, CA1
nTPM: 153.4
2045 Male, age 76, both hemispheres 161.4
2749 Male, age 80, left hemisphere 158.5
2527 Male, age 74, both hemispheres 158.3
2082 Female, age 91, right hemisphere 148.0
1873 Female, age 85, both hemispheres 140.7
Hippocampus, CA2
nTPM: 163.8
2249 Male, age 74, both hemispheres 181.5
2113 Female, age 91, right hemisphere 165.5
2437 Female, age 94, left hemisphere 160.0
1892 Male, age 76, both hemispheres 159.3
1963 Male, age 80, left hemisphere 159.1
1940 Female, age 85, left hemisphere 157.4
Hippocampus, CA3
nTPM: 157.4
1867 Male, age 76, both hemispheres 182.3
2436 Male, age 74, both hemispheres 171.3
1891 Female, age 85, both hemispheres 152.8
2137 Male, age 80, left hemisphere 152.2
2620 Female, age 94, left hemisphere 149.7
2861 Female, age 67, both hemispheres 136.2
Parahippocampal cortex
nTPM: 154.1
2018 Male, age 76, both hemispheres 192.9
1990 Female, age 91, right hemisphere 167.7
2532 Female, age 72, left hemisphere 162.2
1850 Male, age 80, both hemispheres 156.0
2692 Male, age 74, both hemispheres 150.9
1933 Female, age 85, both hemispheres 149.6
2250 Female, age 67, right hemisphere 149.4
2245 Female, age 91, both hemispheres 143.6
2622 Female, age 67, right hemisphere 138.3
2693 Female, age 94, both hemispheres 130.5
Perirhinal gyrus
nTPM: 154.2
1794 Male, age 80, right hemisphere 170.8
2521 Female, age 94, right hemisphere 158.0
1847 Female, age 91, left hemisphere 152.8
2848 Male, age 76, right hemisphere 145.9
1841 Female, age 85, right hemisphere 143.3
Subiculum
nTPM: 163.0
2042 Male, age 76, both hemispheres 174.5
1901 Male, age 80, both hemispheres 170.0
1977 Female, age 85, both hemispheres 169.3
2619 Male, age 74, both hemispheres 167.6
2729 Female, age 91, right hemisphere 160.4
2438 Female, age 94, left hemisphere 136.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 139.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 139.0
Samples: 197

Max nTPM: 383.5
Min nTPM: 81.1
Std nTPM: 41.1
Median nTPM: 132.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 383.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 376.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 325.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 290.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 225.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 221.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 220.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 220.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 208.8
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 206.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 205.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 166.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 166.2
FF:10153-102I9 76 years, female 193.4
FF:10169-103B7 60 years, female 139.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 115.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 116.0
Samples: 4

Max nTPM: 154.8
Min nTPM: 81.6
Sample A Female 154.8
Sample B Female 109.5
Sample C Male 118.0
Sample D Male 81.6
Entorhinal cortex
nTPM: 88.2
Samples: 4

Max nTPM: 102.7
Min nTPM: 68.0
Sample A Female 91.5
Sample B Female 102.7
Sample C Male 90.4
Sample D Male 68.0
Subiculum
nTPM: 93.9
Samples: 4

Max nTPM: 119.6
Min nTPM: 80.3
Sample A Female 119.6
Sample B Female 90.6
Sample C Male 85.2
Sample D Male 80.3
Ventral hippocampus
nTPM: 106.5
Samples: 4

Max nTPM: 130.4
Min nTPM: 79.3
Sample A Female 107.2
Sample B Female 79.3
Sample C Male 130.4
Sample D Male 109.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 309.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 309.6
Samples: 4

Max nTPM: 317.8
Min nTPM: 301.1
Sample A Male 301.1
Sample B Male 317.8
Sample C Female 302.0
Sample D Female 317.6
Hippocampal formation
nTPM: 305.1
Samples: 4

Max nTPM: 315.4
Min nTPM: 295.1
Sample A Male 311.3
Sample B Male 298.5
Sample C Female 315.4
Sample D Female 295.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 28.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 28.3
293263 Antisense, RP_040617_01_A10, Mouse strain C57BL/6J (56 days, male) 28.3

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