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RPL8
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  • TISSUE

  • BRAIN

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  • RPL8
PATHOLOGY OVARIAN CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
ANTIBODIES
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Dictionary
Ovarian cancer
Human pathology
Ovarian cancer
OVARIAN CANCER - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

Read more
RPL8 is not prognostic in ovarian cancer


Stage:
Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

Read more
: 748.22
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

Read more
: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average FPKM 1174.8
Number of samples 373
Samples
Sample Description FPKM
TCGA-29-2425-01A 60 years, female, white, alive, 1977 days 5105.7
TCGA-30-1853-01A 58 years, female, white, dead, 1103 days 3883.2
TCGA-30-1892-01A 52 years, female, white, dead, 1484 days 3686.0
TCGA-13-0766-01A 42 years, female, white, dead, 1725 days 3499.2
TCGA-29-1777-01A 47 years, female, white, alive, 374 days 3396.5
TCGA-24-0979-01A 53 years, female, white, dead, 1264 days 3055.9
TCGA-30-1891-01A 61 years, female, white, dead, 914 days 2962.5
TCGA-61-2008-01A 40 years, female, asian, alive, 932 days 2914.6
TCGA-09-0367-01A 67 years, female, native hawaiian or other pacific islander, dead, 547 days 2848.2
TCGA-09-2056-01B 62 years, female, white, alive, 379 days 2803.0
TCGA-20-1687-01A 46 years, female, white, alive, 81 days 2769.4
TCGA-13-1501-01A 50 years, female, white, dead, 1314 days 2747.8
TCGA-13-0714-01A 55 years, female, white, dead, 189 days 2706.1
TCGA-29-1770-01A 54 years, female, white, alive, 741 days 2678.2
TCGA-10-0936-01A 69 years, female, black or african american, dead, 1123 days 2636.1
TCGA-23-1021-01B 45 years, female, white, dead, 1446 days 2610.5
TCGA-61-1725-01A 40 years, female, white, alive, 956 days 2562.5
TCGA-10-0937-01A 44 years, female, white, dead, 608 days 2544.7
TCGA-23-1027-01A 48 years, female, white, dead, 976 days 2460.0
TCGA-23-1026-01B 45 years, female, white, alive, 816 days 2441.3
TCGA-61-1907-01A 63 years, female, white, alive, 952 days 2406.3
TCGA-36-1568-01A 52 years, female, alive, 875 days 2367.8
TCGA-61-1914-01A 65 years, female, alive, 1722 days 2350.6
TCGA-09-1659-01B 51 years, female, white, dead, 304 days 2331.1
TCGA-57-1582-01A female, white, dead, 731 days 2287.6
TCGA-13-1483-01A 61 years, female, white, dead, 895 days 2264.6
TCGA-23-1022-01A 67 years, female, white, dead, 1511 days 2262.5
TCGA-29-1693-01A 72 years, female, white, alive, 3096 days 2222.8
TCGA-24-1467-01A 51 years, female, white, dead, 3224 days 2197.8
TCGA-29-1784-01A 55 years, female, white, alive, 163 days 2195.7
TCGA-10-0938-01A 80 years, female, white, dead, 636 days 2151.9
TCGA-61-1910-01A 56 years, female, white, alive, 1127 days 2142.3
TCGA-20-1682-01A 56 years, female, white, alive, 837 days 2137.2
TCGA-30-1857-01A 64 years, female, white, dead, 8 days 2120.0
TCGA-04-1350-01A 46 years, female, white, dead, 1946 days 2093.0
TCGA-29-1768-01A 50 years, female, white, dead, 952 days 2035.8
TCGA-13-0924-01A 45 years, female, white, alive, 2614 days 2027.4
TCGA-13-0884-01B 39 years, female, white, dead, 3260 days 2026.2
TCGA-25-2401-01A 64 years, female, white, dead, 90 days 2016.2
TCGA-61-1728-01A 59 years, female, white, alive, 848 days 2008.4
TCGA-04-1341-01A 85 years, female, white, alive, 33 days 1995.2
TCGA-10-0931-01A 44 years, female, white, dead, 1000 days 1993.5
TCGA-10-0927-01A 65 years, female, dead, 2490 days 1991.7
TCGA-30-1861-01A 74 years, female, white, dead, 1058 days 1980.1
TCGA-13-0897-01A 54 years, female, white, dead, 2182 days 1971.9
TCGA-13-0916-01A 49 years, female, white, alive, 1785 days 1958.3
TCGA-23-1113-01A 48 years, female, white, dead, 949 days 1955.5
TCGA-61-2000-01A 67 years, female, white, alive, 441 days 1946.8
TCGA-29-1694-01A 45 years, female, white, dead, 1187 days 1942.0
TCGA-23-1028-01A 43 years, female, white, alive, 1503 days 1930.6
TCGA-13-1507-01A 77 years, female, white, dead, 1993 days 1930.2
TCGA-29-1705-01A 48 years, female, white, dead, 555 days 1906.4
TCGA-24-1604-01A 67 years, female, white, dead, 2688 days 1903.3
TCGA-24-0966-01A 78 years, female, black or african american, alive, 232 days 1888.5
TCGA-30-1714-01A 68 years, female, white, dead, 1158 days 1870.7
TCGA-59-2355-01A female, white, dead, 65 days 1851.7
TCGA-13-1404-01A 48 years, female, white, alive, 2469 days 1794.8
TCGA-61-1998-01A 48 years, female, white, alive, 168 days 1790.7
TCGA-09-1669-01A 54 years, female, white, alive, 928 days 1790.5
TCGA-10-0928-01A 71 years, female, white, dead, 563 days 1776.8
TCGA-13-0762-01A 65 years, female, white, alive, 3400 days 1770.3
TCGA-20-0991-01A 78 years, female, white, alive, 797 days 1765.3
TCGA-09-1665-01B 74 years, female, white, dead, 1266 days 1741.9
TCGA-04-1542-01A 52 years, female, white, dead, 2561 days 1705.9
TCGA-24-2023-01A 54 years, female, white, dead, 1364 days 1701.7
TCGA-29-1761-01A 80 years, female, asian, dead, 528 days 1700.5
TCGA-04-1361-01A 57 years, female, white, alive, 989 days 1693.7
TCGA-13-0893-01B 48 years, female, black or african american, dead, 1319 days 1692.5
TCGA-25-1318-01A 54 years, female, white, dead, 1064 days 1686.1
TCGA-13-0797-01A 49 years, female, white, alive, 2121 days 1684.7
TCGA-13-1510-01A 62 years, female, white, dead, 1359 days 1674.7
TCGA-61-1919-01A 58 years, female, white, dead, 1161 days 1656.9
TCGA-29-1696-01A 43 years, female, white, dead, 1032 days 1642.1
TCGA-13-1512-01A 49 years, female, white, alive, 442 days 1640.3
TCGA-23-1109-01A 63 years, female, white, dead, 1562 days 1633.3
TCGA-09-1670-01A 57 years, female, white, alive, 547 days 1630.1
TCGA-30-1718-01A 44 years, female, white, dead, 1579 days 1629.5
TCGA-09-1666-01A 57 years, female, white, alive, 1752 days 1626.4
TCGA-29-1781-01A 69 years, female, white, alive, 255 days 1625.9
TCGA-24-2038-01A 68 years, female, white, dead, 1354 days 1623.5
TCGA-13-0765-01A 50 years, female, white, dead, 1389 days 1621.3
TCGA-04-1343-01A 72 years, female, white, dead, 361 days 1618.8
TCGA-24-1431-01A 67 years, female, white, dead, 567 days 1618.5
TCGA-13-0887-01A 42 years, female, white, dead, 2028 days 1616.0
TCGA-20-0987-01A 61 years, female, white, dead, 701 days 1608.7
TCGA-29-1776-01A 63 years, female, black or african american, alive, 360 days 1602.5
TCGA-13-0725-01A 44 years, female, white, dead, 377 days 1597.2
TCGA-23-1024-01A 52 years, female, white, alive, 468 days 1587.0
TCGA-24-1552-01A 77 years, female, white, dead, 1259 days 1581.5
TCGA-36-1569-01A 52 years, female, white, alive, 885 days 1579.3
TCGA-29-2427-01A 60 years, female, white, alive, 1900 days 1566.8
TCGA-13-1509-01A 64 years, female, white, alive, 2438 days 1564.9
TCGA-25-1632-01A 68 years, female, white, dead, 1799 days 1559.0
TCGA-13-1409-01A 73 years, female, white, dead, 1742 days 1553.1
TCGA-13-0908-01B 58 years, female, white, dead, 1843 days 1536.7
TCGA-61-1736-01B 45 years, female, white, dead, 1484 days 1522.9
TCGA-23-1023-01A 65 years, female, white, alive, 1233 days 1488.5
TCGA-13-0726-01A 55 years, female, white, dead, 949 days 1479.2
TCGA-09-1662-01A 58 years, female, white, dead, 2717 days 1474.7
TCGA-04-1364-01A 61 years, female, white, dead, 1024 days 1466.3
TCGA-29-1688-01A 39 years, female, white, dead, 2400 days 1459.7
TCGA-VG-A8LO-01A 55 years, female, black or african american, dead, 24 days 1450.6
TCGA-24-1471-01A 60 years, female, white, alive, 36 days 1427.4
TCGA-24-1845-01A 42 years, female, white, alive, 116 days 1424.7
TCGA-24-1846-01A 45 years, female, alive, 133 days 1422.3
TCGA-61-2002-01A 46 years, female, white, alive, 547 days 1421.2
TCGA-29-1785-01A 55 years, female, white, dead, 1104 days 1413.9
TCGA-61-2097-01A 71 years, female, white, alive, 1844 days 1404.1
TCGA-25-1317-01A 66 years, female, white, dead, 61 days 1396.7
TCGA-24-1428-01A 50 years, female, white, alive, 529 days 1395.1
TCGA-25-2409-01A 71 years, female, white, dead, 821 days 1394.1
TCGA-23-1029-01B 46 years, female, white, alive, 268 days 1392.6
TCGA-24-0982-01A 77 years, female, white, dead, 679 days 1391.7
TCGA-57-1585-01A 57 years, female, white, dead, 53 days 1390.9
TCGA-13-0920-01A 65 years, female, white, dead, 1484 days 1384.1
TCGA-24-2281-01A 68 years, female, white, alive, 1357 days 1383.6
TCGA-25-1877-01A 81 years, female, white, dead, 730 days 1379.9
TCGA-24-2033-01A 87 years, female, white, dead, 562 days 1373.8
TCGA-04-1651-01A 53 years, female, white, dead, 1102 days 1366.7
TCGA-13-0804-01A 74 years, female, white, dead, 1073 days 1365.0
TCGA-61-1721-01A 38 years, female, white, alive, 338 days 1330.3
TCGA-29-1769-01A 40 years, female, white, alive, 699 days 1326.2
TCGA-25-1316-01A 55 years, female, white, dead, 1279 days 1322.8
TCGA-31-1956-01A 60 years, female, white, alive, 1342 days 1318.8
TCGA-24-1546-01A 46 years, female, white, dead, 1955 days 1293.8
TCGA-29-1701-01A 56 years, female, white, dead, 515 days 1288.0
TCGA-29-1690-01A 66 years, female, white, dead, 1448 days 1287.4
TCGA-04-1362-01A 59 years, female, white, dead, 1348 days 1285.3
TCGA-24-2035-01A 65 years, female, white, dead, 857 days 1285.0
TCGA-24-1416-01A 34 years, female, white, alive, 194 days 1278.2
TCGA-24-1464-01A 70 years, female, white, dead, 379 days 1276.9
TCGA-23-1119-01A 64 years, female, white, alive, 3953 days 1276.8
TCGA-13-0727-01A 71 years, female, white, dead, 462 days 1275.7
TCGA-36-1570-01A 49 years, female, white, alive, 655 days 1274.5
TCGA-13-1489-01A 70 years, female, white, dead, 2553 days 1272.3
TCGA-13-1506-01A 45 years, female, white, dead, 1039 days 1250.8
TCGA-23-1107-01A 59 years, female, white, dead, 9 days 1249.4
TCGA-24-1426-01A 43 years, female, white, alive, 163 days 1248.9
TCGA-59-2351-01A female, white, alive, 3532 days 1238.1
TCGA-24-2298-01A 56 years, female, white, dead, 1620 days 1237.9
TCGA-59-2363-01A female, asian, alive, 165 days 1224.3
TCGA-31-1944-01A 47 years, female, white, alive, 1386 days 1219.5
TCGA-61-2101-01A 55 years, female, white, dead, 1688 days 1215.4
TCGA-31-1946-01A 30 years, female, alive, 918 days 1210.7
TCGA-57-1584-01A 47 years, female, white, alive, 643 days 1199.7
TCGA-23-2084-01A 45 years, female, white, dead, 1516 days 1190.9
TCGA-29-1697-01A 62 years, female, white, dead, 949 days 1188.4
TCGA-13-0720-01A 48 years, female, white, dead, 1355 days 1174.9
TCGA-25-1312-01A 69 years, female, white, dead, 31 days 1174.4
TCGA-13-1499-01A 56 years, female, white, alive, 3500 days 1171.5
TCGA-23-1116-01A 83 years, female, white, dead, 592 days 1169.3
TCGA-24-1104-01A 56 years, female, white, dead, 1933 days 1166.2
TCGA-04-1519-01A 48 years, female, alive, 24 days 1164.9
TCGA-13-1408-01A 59 years, female, white, dead, 1680 days 1162.8
TCGA-24-1413-01A 51 years, female, white, alive, 192 days 1162.5
TCGA-61-1918-01A 45 years, female, white, dead, 479 days 1162.4
TCGA-04-1338-01A 78 years, female, white, alive, 1418 days 1159.3
TCGA-29-2414-01A 75 years, female, white, dead, 2621 days 1157.9
TCGA-30-1862-01A 65 years, female, white, dead, 186 days 1155.5
TCGA-24-1103-01A 50 years, female, black or african american, dead, 1646 days 1154.2
TCGA-13-1497-01A 48 years, female, white, alive, 3871 days 1149.9
TCGA-25-1329-01A 76 years, female, white, dead, 457 days 1139.1
TCGA-13-1403-01A 48 years, female, white, dead, 2345 days 1137.2
TCGA-23-1118-01A 45 years, female, white, alive, 2616 days 1135.2
TCGA-13-0724-01A 72 years, female, white, dead, 83 days 1134.8
TCGA-24-1844-01A 64 years, female, white, alive, 113 days 1115.3
TCGA-25-2393-01A 81 years, female, white, dead, 1157 days 1114.8
TCGA-23-1122-01A 53 years, female, white, dead, 1189 days 1111.6
TCGA-36-1571-01A 53 years, female, white, dead, 695 days 1106.9
TCGA-24-1923-01A 51 years, female, white, dead, 690 days 1101.8
TCGA-13-0795-01A 66 years, female, white, dead, 619 days 1098.3
TCGA-23-1111-01A 63 years, female, white, alive, 98 days 1098.0
TCGA-31-1959-01A 49 years, female, white, alive, 67 days 1095.4
TCGA-13-1477-01A 49 years, female, white, dead, 1662 days 1087.6
TCGA-25-2404-01A 38 years, female, american indian or alaska native, dead, 883 days 1085.6
TCGA-57-1583-01A 57 years, female, black or african american, dead, 346 days 1083.3
TCGA-24-2290-01A 56 years, female, white, dead, 1102 days 1083.0
TCGA-24-1563-01A 66 years, female, black or african american, dead, 1451 days 1078.0
TCGA-29-1783-01A 58 years, female, white, alive, 220 days 1071.7
TCGA-24-1562-01A 67 years, female, white, dead, 1384 days 1066.9
TCGA-61-1738-01A 60 years, female, black or african american, dead, 1089 days 1066.3
TCGA-29-1766-01A 74 years, female, white, dead, 1199 days 1060.9
TCGA-24-1105-01A 36 years, female, white, dead, 1442 days 1059.0
TCGA-23-1110-01A 42 years, female, white, alive, 1658 days 1057.8
TCGA-13-0900-01B 59 years, female, white, alive, 4077 days 1051.4
TCGA-20-1686-01A 75 years, female, white, alive, 89 days 1047.5
TCGA-25-2400-01A 76 years, female, white, dead, 1278 days 1044.9
TCGA-25-1634-01A 76 years, female, white, dead, 1091 days 1042.3
TCGA-57-1586-01A 66 years, female, white, alive, 679 days 1037.4
TCGA-13-0911-01A 55 years, female, white, dead, 1355 days 1034.6
TCGA-61-2009-01A 65 years, female, white, alive, 1212 days 1029.5
TCGA-13-1410-01A 57 years, female, white, alive, 2464 days 1022.7
TCGA-24-2024-01A 72 years, female, black or african american, dead, 1769 days 1016.4
TCGA-13-0923-01A 74 years, female, white, alive, 2547 days 1012.1
TCGA-24-1553-01A 53 years, female, white, dead, 1767 days 1007.8
TCGA-25-1630-01A 73 years, female, white, dead, 1162 days 1003.3
TCGA-61-1724-01A 47 years, female, white, dead, 637 days 994.3
TCGA-04-1365-01A 87 years, female, white, alive, 2329 days 991.0
TCGA-61-2109-01A 40 years, female, white, dead, 629 days 989.2
TCGA-13-0885-01A 70 years, female, white, alive, 3388 days 978.5
TCGA-36-1577-01A 43 years, female, asian, alive, 783 days 968.7
TCGA-09-0364-01A 80 years, female, white, dead, 887 days 966.3
TCGA-23-2077-01A 45 years, female, white, alive, 3525 days 960.1
TCGA-24-1419-01A 62 years, female, white, alive, 239 days 959.7
TCGA-25-1328-01A 38 years, female, white, dead, 2009 days 954.7
TCGA-29-2428-01A 58 years, female, white, alive, 1372 days 954.0
TCGA-13-1407-01A 51 years, female, white, alive, 2534 days 952.3
TCGA-24-1847-01A 45 years, female, white, alive, 343 days 946.4
TCGA-24-2297-01A 56 years, female, white, dead, 1699 days 936.5
TCGA-13-1487-01A 74 years, female, white, dead, 681 days 936.5
TCGA-36-1574-01A 48 years, female, asian, alive, 686 days 936.2
TCGA-13-0906-01A 50 years, female, white, alive, 3619 days 932.3
TCGA-25-2396-01A 71 years, female, white, dead, 92 days 928.8
TCGA-13-1485-01A 48 years, female, white, dead, 629 days 907.9
TCGA-30-1866-01A 61 years, female, white, dead, 1114 days 899.6
TCGA-61-1995-01A 43 years, female, white, alive, 61 days 897.2
TCGA-59-2350-01A female, dead, 679 days 893.4
TCGA-25-2392-01A 75 years, female, white, dead, 31 days 890.6
TCGA-13-1488-01A 59 years, female, white, dead, 2154 days 889.8
TCGA-24-1603-01A 53 years, female, white, dead, 2742 days 886.9
TCGA-09-2053-01C 72 years, female, white, alive, 1209 days 876.4
TCGA-09-1661-01B 75 years, female, white, dead, 1169 days 874.5
TCGA-13-1498-01A 73 years, female, white, dead, 2012 days 874.2
TCGA-24-1418-01A 68 years, female, white, alive, 243 days 870.2
TCGA-13-1505-01A 63 years, female, white, alive, 1998 days 856.5
TCGA-24-1557-01A 49 years, female, white, dead, 1213 days 852.4
TCGA-61-2104-01A 53 years, female, white, alive, 2338 days 845.3
TCGA-25-1321-01A 65 years, female, white, dead, 1033 days 843.9
TCGA-13-2060-01A 51 years, female, white, alive, 2369 days 843.7
TCGA-25-1631-01A 73 years, female, white, dead, 9 days 839.9
TCGA-29-1703-01A 56 years, female, black or african american, dead, 1815 days 838.0
TCGA-61-1900-01A 51 years, female, black or african american, alive, 176 days 836.8
TCGA-59-A5PD-01A 55 years, female, black or african american, dead, 624 days 836.1
TCGA-13-0768-01A 73 years, female, white, dead, 1784 days 832.0
TCGA-24-2267-01A 58 years, female, white, dead, 1446 days 829.8
TCGA-24-1544-01A 71 years, female, black or african american, dead, 820 days 829.0
TCGA-61-1737-01A 42 years, female, white, alive, 1364 days 821.1
TCGA-23-2078-01A 66 years, female, white, alive, 2661 days 819.0
TCGA-13-1495-01A 60 years, female, white, dead, 2749 days 814.2
TCGA-36-1580-01A 82 years, female, dead, 737 days 808.1
TCGA-20-1683-01A 65 years, female, white, alive, 772 days 803.1
TCGA-24-1930-01A 53 years, female, white, dead, 2467 days 782.8
TCGA-13-A5FT-01A 67 years, female, black or african american, alive, 2143 days 778.4
TCGA-29-1778-01A 77 years, female, white, alive, 454 days 777.7
TCGA-24-1560-01A 51 years, female, white, dead, 1341 days 773.1
TCGA-24-1924-01A 65 years, female, white, dead, 919 days 771.9
TCGA-24-2262-01A 57 years, female, white, dead, 11 days 770.4
TCGA-13-0886-01A 67 years, female, white, alive, 4665 days 759.7
TCGA-25-2391-01A 57 years, female, white, dead, 1492 days 758.8
TCGA-04-1332-01A 70 years, female, white, dead, 1247 days 758.2
TCGA-04-1655-01A 49 years, female, white, dead, 1380 days 757.4
TCGA-13-0883-01A 61 years, female, white, dead, 2097 days 754.3
TCGA-04-1347-01A 81 years, female, white, alive, 1919 days 753.7
TCGA-25-1326-01A 61 years, female, white, dead, 1249 days 742.7
TCGA-24-1567-01A 54 years, female, white, dead, 524 days 742.2
TCGA-09-2045-01A 50 years, female, asian, dead, 1069 days 738.5
TCGA-25-1870-01A 59 years, female, white, dead, 455 days 736.2
TCGA-13-0730-01A 71 years, female, white, dead, 542 days 736.2
TCGA-24-2288-01A 70 years, female, white, dead, 25 days 734.1
TCGA-29-1774-01A 82 years, female, white, alive, 527 days 728.4
TCGA-24-1423-01A 61 years, female, white, alive, 190 days 727.3
TCGA-25-1627-01A 73 years, female, white, dead, 394 days 719.9
TCGA-24-1565-01A 74 years, female, white, dead, 312 days 719.8
TCGA-25-1323-01A 72 years, female, white, dead, 395 days 716.6
TCGA-25-1313-01A 62 years, female, white, dead, 820 days 709.6
TCGA-23-1123-01A 59 years, female, white, dead, 1018 days 703.5
TCGA-13-0901-01B 42 years, female, asian, alive, 589 days 702.0
TCGA-24-2020-01A 67 years, female, white, dead, 4624 days 700.4
TCGA-09-2051-01A 42 years, female, white, alive, 1919 days 697.7
TCGA-24-1435-01A 57 years, female, white, dead, 1324 days 691.8
TCGA-OY-A56Q-01A 78 years, female, black or african american, alive, 576 days 691.6
TCGA-24-2271-01A 55 years, female, asian, dead, 962 days 690.5
TCGA-13-0888-01A 78 years, female, white, dead, 2811 days 682.9
TCGA-04-1536-01A 60 years, female, black or african american, dead, 885 days 681.6
TCGA-25-1315-01A 50 years, female, white, dead, 1583 days 681.5
TCGA-61-2110-01A 56 years, female, white, dead, 1354 days 678.5
TCGA-24-0968-01A 59 years, female, white, dead, 598 days 677.8
TCGA-29-1711-01A 45 years, female, black or african american, alive, 1053 days 677.0
TCGA-61-1911-01A 55 years, female, white, alive, 1293 days 674.9
TCGA-13-1411-01A 81 years, female, white, dead, 531 days 673.6
TCGA-31-1953-01A 52 years, female, asian, alive, 204 days 670.4
TCGA-25-2399-01A 80 years, female, white, dead, 608 days 670.1
TCGA-WR-A838-01A 72 years, female, black or african american, dead, 304 days 666.6
TCGA-24-2289-01A 69 years, female, white, dead, 2049 days 664.0
TCGA-24-1558-01A 73 years, female, white, dead, 594 days 662.6
TCGA-25-1322-01A 62 years, female, white, dead, 91 days 660.8
TCGA-24-1470-01A 54 years, female, white, alive, 105 days 657.7
TCGA-24-1417-01A 54 years, female, white, alive, 238 days 656.9
TCGA-13-0891-01A 73 years, female, white, dead, 3128 days 652.8
TCGA-09-2044-01B 77 years, female, asian, alive, 186 days 650.6
TCGA-24-2293-01A 47 years, female, white, dead, 506 days 636.8
TCGA-29-1763-01A 43 years, female, black or african american, alive, 2032 days 634.6
TCGA-09-1673-01A 50 years, female, white, alive, 92 days 633.7
TCGA-04-1356-01A 62 years, female, white, dead, 1499 days 630.2
TCGA-09-1668-01B 57 years, female, white, alive, 1684 days 629.3
TCGA-24-1422-01A 82 years, female, black or african american, dead, 23 days 627.5
TCGA-25-1320-01A 65 years, female, white, dead, 1155 days 622.6
TCGA-61-2092-01A 57 years, female, white, alive, 1573 days 621.7
TCGA-25-2042-01A 60 years, female, american indian or alaska native, dead, 396 days 619.4
TCGA-13-1511-01A 52 years, female, asian, dead, 1650 days 604.2
TCGA-24-1425-01A 45 years, female, white, alive, 181 days 603.7
TCGA-59-2348-01A female, white, alive, 5481 days 601.1
TCGA-09-1667-01C 61 years, female, white, alive, 1882 days 600.2
TCGA-25-1635-01A 71 years, female, white, dead, 1583 days 597.7
TCGA-25-1623-01A 71 years, female, white, dead, 565 days 592.9
TCGA-13-1496-01A 65 years, female, white, dead, 129 days 591.0
TCGA-31-1951-01A 58 years, female, white, alive, 684 days 587.5
TCGA-59-2354-01A female, white, dead, 1046 days 580.4
TCGA-36-1576-01A 76 years, female, alive, 915 days 579.9
TCGA-13-0800-01A 52 years, female, white, alive, 2661 days 574.0
TCGA-24-2026-01A 79 years, female, white, dead, 1059 days 573.4
TCGA-24-1430-01A 68 years, female, white, dead, 863 days 572.9
TCGA-24-1843-01A 67 years, female, white, alive, 106 days 570.1
TCGA-24-1616-01A 56 years, female, white, dead, 1163 days 563.7
TCGA-24-1842-01A 49 years, female, white, alive, 253 days 560.1
TCGA-24-2280-01A 74 years, female, white, alive, 2143 days 558.4
TCGA-09-2048-01A 63 years, female, white, dead, 138 days 558.4
TCGA-24-1850-01A 72 years, female, white, alive, 168 days 556.8
TCGA-25-1633-01A 64 years, female, white, dead, 1891 days 555.5
TCGA-24-1427-01A 58 years, female, alive, 147 days 553.3
TCGA-29-1695-01A 62 years, female, white, dead, 1229 days 543.1
TCGA-25-2398-01A 71 years, female, white, dead, 1369 days 539.0
TCGA-24-2261-01A 76 years, female, white, dead, 24 days 534.3
TCGA-24-1434-01A 59 years, female, white, dead, 568 days 532.1
TCGA-24-2254-01A 66 years, female, white, dead, 1736 days 529.2
TCGA-61-2012-01A 81 years, female, white, alive, 932 days 522.2
TCGA-13-0905-01B 51 years, female, white, alive, 3746 days 507.5
TCGA-24-1474-01A 57 years, female, black or african american, dead, 676 days 506.3
TCGA-24-2036-01A 50 years, female, white, dead, 1947 days 505.8
TCGA-09-2054-01A 58 years, female, black or african american, dead, 637 days 501.9
TCGA-29-1691-01A 51 years, female, white, dead, 1470 days 497.0
TCGA-10-0933-01A 77 years, female, white, dead, 446 days 496.4
TCGA-09-0369-01A 56 years, female, white, dead, 1082 days 490.5
TCGA-61-1741-01A 76 years, female, white, dead, 1024 days 488.8
TCGA-29-1762-01A 59 years, female, white, dead, 2634 days 483.0
TCGA-5X-AA5U-01A 61 years, female, black or african american, alive, 361 days 479.0
TCGA-29-1710-01A 54 years, female, white, dead, 951 days 471.9
TCGA-30-1860-01A 58 years, female, white, dead, 1366 days 470.0
TCGA-13-1405-01A 49 years, female, white, dead, 868 days 466.2
TCGA-04-1331-01A 79 years, female, white, dead, 1336 days 465.5
TCGA-61-2113-01A 54 years, female, white, dead, 676 days 464.4
TCGA-61-2003-01A 53 years, female, white, alive, 122 days 459.4
TCGA-13-1492-01A 66 years, female, white, dead, 3819 days 458.6
TCGA-24-1550-01A 49 years, female, white, dead, 1249 days 454.2
TCGA-24-2027-01A 51 years, female, white, dead, 3337 days 450.5
TCGA-24-1469-01A 71 years, female, white, alive, 277 days 448.1
TCGA-24-1551-01A 53 years, female, white, dead, 1579 days 444.5
TCGA-25-1628-01A 67 years, female, white, dead, 627 days 441.2
TCGA-59-2352-01A female, white, dead, 286 days 441.0
TCGA-61-1733-01A 71 years, female, white, alive, 967 days 438.8
TCGA-29-A5NZ-01A 66 years, female, black or african american, dead, 1088 days 431.4
TCGA-23-1030-01A 64 years, female, white, alive, 886 days 403.5
TCGA-57-1993-01A 56 years, female, white, alive, 763 days 402.2
TCGA-24-0970-01B 63 years, female, white, dead, 354 days 401.3
TCGA-24-1549-01A 58 years, female, white, dead, 1721 days 396.9
TCGA-04-1648-01A 57 years, female, white, dead, 871 days 394.4
TCGA-09-0366-01A 56 years, female, white, dead, 1757 days 387.8
TCGA-23-1120-01A 60 years, female, white, alive, 130 days 380.8
TCGA-24-1928-01A 77 years, female, white, dead, 336 days 373.0
TCGA-25-1626-01A 65 years, female, white, dead, 518 days 360.6
TCGA-61-2098-01A 62 years, female, white, alive, 1993 days 358.3
TCGA-23-1114-01B 55 years, female, white, dead, 2089 days 358.3
TCGA-24-1424-01A 67 years, female, white, alive, 183 days 353.1
TCGA-61-2102-01A 74 years, female, white, dead, 197 days 351.0
TCGA-61-2088-01A 51 years, female, white, alive, 145 days 334.3
TCGA-57-1994-01A 63 years, female, white, alive, 761 days 332.0
TCGA-31-1950-01A 76 years, female, white, alive, 571 days 308.4
TCGA-04-1530-01A 68 years, female, white, dead, 3622 days 306.5
TCGA-61-2111-01A 61 years, female, white, alive, 3825 days 296.9
TCGA-04-1514-01A 45 years, female, white, dead, 1720 days 294.5
TCGA-23-1809-01A 63 years, female, white, alive, 16 days 288.3
TCGA-25-1319-01A 73 years, female, white, dead, 1977 days 259.6
TCGA-36-1581-01A 63 years, female, white, alive, 751 days 246.8
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OVARIAN CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more

Antibody HPA045095

Antibody HPA050165
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Click images for details

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The Human Protein Atlas

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.