HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:9.5 nTPM
HPA:9.5 nTPM
GTEx:9.7 nTPM
FANTOM5:18.9 Scaled Tags Per Million
Pig:4.5 nTPM
Mouse:47.3 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052083
Glial cells Medium
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.5
Sample id Sample description nTPM
Hippocampus
nTPM: 9.2
2621 Female, age 67, right hemisphere 10.2
2148 Female, age 91, left hemisphere 9.6
1898 Male, age 80, left hemisphere 9.2
1911 Female, age 85, right hemisphere 9.0
2529 Female, age 94, left hemisphere 8.9
1855 Male, age 76, left hemisphere 8.2
Dentate gyrus
nTPM: 9.1
2246 Female, age 85, both hemispheres 9.7
2530 Female, age 94, left hemisphere 9.2
2010 Male, age 76, both hemispheres 9.0
2528 Male, age 74, both hemispheres 8.9
1927 Female, age 91, both hemispheres 8.8
2531 Female, age 67, both hemispheres 8.8
Entorhinal gyrus
nTPM: 9.2
1938 Female, age 85, left hemisphere 10.0
2764 Male, age 80, right hemisphere 10.0
2613 Female, age 94, left hemisphere 9.6
2117 Female, age 91, right hemisphere 8.7
1787 Male, age 76, left hemisphere 8.6
2686 Male, age 75, right hemisphere 8.2
Hippocampus, CA1
nTPM: 9.4
2749 Male, age 80, left hemisphere 11.0
1873 Female, age 85, both hemispheres 9.5
2045 Male, age 76, both hemispheres 9.2
2082 Female, age 91, right hemisphere 9.0
2527 Male, age 74, both hemispheres 8.4
Hippocampus, CA2
nTPM: 8.9
1892 Male, age 76, both hemispheres 10.1
1963 Male, age 80, left hemisphere 9.4
1940 Female, age 85, left hemisphere 9.0
2249 Male, age 74, both hemispheres 8.6
2113 Female, age 91, right hemisphere 8.2
2437 Female, age 94, left hemisphere 7.9
Hippocampus, CA3
nTPM: 9.1
1867 Male, age 76, both hemispheres 10.7
2137 Male, age 80, left hemisphere 10.5
1891 Female, age 85, both hemispheres 8.6
2620 Female, age 94, left hemisphere 8.4
2436 Male, age 74, both hemispheres 8.2
2861 Female, age 67, both hemispheres 8.0
Parahippocampal cortex
nTPM: 9.2
2532 Female, age 72, left hemisphere 10.7
2245 Female, age 91, both hemispheres 10.3
2622 Female, age 67, right hemisphere 9.4
2692 Male, age 74, both hemispheres 9.3
1990 Female, age 91, right hemisphere 9.2
2250 Female, age 67, right hemisphere 9.1
1850 Male, age 80, both hemispheres 8.6
1933 Female, age 85, both hemispheres 8.5
2018 Male, age 76, both hemispheres 8.5
2693 Female, age 94, both hemispheres 8.2
Perirhinal gyrus
nTPM: 9.5
1847 Female, age 91, left hemisphere 10.6
1794 Male, age 80, right hemisphere 9.7
1841 Female, age 85, right hemisphere 9.5
2848 Male, age 76, right hemisphere 9.1
2521 Female, age 94, right hemisphere 8.6
Subiculum
nTPM: 9.3
1901 Male, age 80, both hemispheres 10.6
1977 Female, age 85, both hemispheres 9.7
2438 Female, age 94, left hemisphere 9.7
2042 Male, age 76, both hemispheres 9.3
2619 Male, age 74, both hemispheres 9.2
2729 Female, age 91, right hemisphere 7.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.7
Samples: 197

Max nTPM: 25.0
Min nTPM: 2.1
Std nTPM: 3.9
Median nTPM: 9.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 25.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 24.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 22.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 20.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 20.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 18.3
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 17.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 17.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 17.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 17.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 16.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.9
FF:10169-103B7 60 years, female 25.1
FF:10153-102I9 76 years, female 12.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.5
Samples: 4

Max nTPM: 5.7
Min nTPM: 3.8
Sample A Female 5.7
Sample B Female 4.1
Sample C Male 4.3
Sample D Male 3.8
Entorhinal cortex
nTPM: 4.1
Samples: 4

Max nTPM: 4.7
Min nTPM: 3.4
Sample A Female 4.6
Sample B Female 4.7
Sample C Male 3.7
Sample D Male 3.4
Subiculum
nTPM: 3.8
Samples: 4

Max nTPM: 4.4
Min nTPM: 3.3
Sample A Female 4.4
Sample B Female 3.7
Sample C Male 3.3
Sample D Male 3.6
Ventral hippocampus
nTPM: 4.1
Samples: 4

Max nTPM: 4.8
Min nTPM: 2.9
Sample A Female 4.4
Sample B Female 2.9
Sample C Male 4.8
Sample D Male 4.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.2
Samples: 4

Max nTPM: 47.9
Min nTPM: 37.6
Sample A Male 43.7
Sample B Male 47.9
Sample C Female 47.6
Sample D Female 37.6
Hippocampal formation
nTPM: 47.3
Samples: 4

Max nTPM: 49.4
Min nTPM: 43.7
Sample A Male 49.2
Sample B Male 43.7
Sample C Female 46.9
Sample D Female 49.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
74562248 Antisense, RP_060208_02_E05, Mouse strain C57BL/6J (56 days, male) 0.6

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