HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1402.1 nTPM
HPA:1402.1 nTPM
GTEx:1481.0 nTPM
FANTOM5:70.5 Scaled Tags Per Million
Pig:218.0 nTPM
Mouse:1568.8 nTPM
Allen mouse:11.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030449Antibody CAB037301
Glial cells Not detectedMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1402.1
Sample id Sample description nTPM
Hippocampus
nTPM: 1401.6
2621 Female, age 67, right hemisphere 1431.3
2529 Female, age 94, left hemisphere 1422.7
1898 Male, age 80, left hemisphere 1416.0
1855 Male, age 76, left hemisphere 1393.2
1911 Female, age 85, right hemisphere 1384.5
2148 Female, age 91, left hemisphere 1361.8
Dentate gyrus
nTPM: 1397.0
2530 Female, age 94, left hemisphere 1466.0
2246 Female, age 85, both hemispheres 1411.7
2010 Male, age 76, both hemispheres 1401.0
2531 Female, age 67, both hemispheres 1389.3
1927 Female, age 91, both hemispheres 1365.8
2528 Male, age 74, both hemispheres 1348.2
Entorhinal gyrus
nTPM: 1388.1
2686 Male, age 75, right hemisphere 1431.5
1787 Male, age 76, left hemisphere 1408.6
2117 Female, age 91, right hemisphere 1381.5
1938 Female, age 85, left hemisphere 1380.2
2764 Male, age 80, right hemisphere 1363.4
2613 Female, age 94, left hemisphere 1363.3
Hippocampus, CA1
nTPM: 1380.7
1873 Female, age 85, both hemispheres 1395.0
2045 Male, age 76, both hemispheres 1387.9
2527 Male, age 74, both hemispheres 1375.9
2082 Female, age 91, right hemisphere 1375.3
2749 Male, age 80, left hemisphere 1369.7
Hippocampus, CA2
nTPM: 1387.2
1892 Male, age 76, both hemispheres 1422.8
1963 Male, age 80, left hemisphere 1417.9
2437 Female, age 94, left hemisphere 1384.1
2113 Female, age 91, right hemisphere 1367.7
1940 Female, age 85, left hemisphere 1367.0
2249 Male, age 74, both hemispheres 1363.6
Hippocampus, CA3
nTPM: 1368.3
1867 Male, age 76, both hemispheres 1419.4
1891 Female, age 85, both hemispheres 1396.6
2861 Female, age 67, both hemispheres 1369.2
2137 Male, age 80, left hemisphere 1365.5
2436 Male, age 74, both hemispheres 1334.5
2620 Female, age 94, left hemisphere 1324.6
Parahippocampal cortex
nTPM: 1384.6
2018 Male, age 76, both hemispheres 1437.4
1850 Male, age 80, both hemispheres 1398.3
2532 Female, age 72, left hemisphere 1397.9
2250 Female, age 67, right hemisphere 1393.2
2245 Female, age 91, both hemispheres 1389.8
2692 Male, age 74, both hemispheres 1379.9
1933 Female, age 85, both hemispheres 1373.0
1990 Female, age 91, right hemisphere 1373.0
2693 Female, age 94, both hemispheres 1352.7
2622 Female, age 67, right hemisphere 1351.1
Perirhinal gyrus
nTPM: 1395.4
2848 Male, age 76, right hemisphere 1414.3
1841 Female, age 85, right hemisphere 1409.2
1794 Male, age 80, right hemisphere 1400.2
1847 Female, age 91, left hemisphere 1392.6
2521 Female, age 94, right hemisphere 1360.7
Subiculum
nTPM: 1402.1
2438 Female, age 94, left hemisphere 1451.3
1977 Female, age 85, both hemispheres 1419.8
2042 Male, age 76, both hemispheres 1413.9
1901 Male, age 80, both hemispheres 1394.3
2619 Male, age 74, both hemispheres 1368.6
2729 Female, age 91, right hemisphere 1364.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1481.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1481.0
Samples: 197

Max nTPM: 4569.0
Min nTPM: 700.7
Std nTPM: 526.3
Median nTPM: 1375.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 4569.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 3305.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2873.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2855.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2851.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2849.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2820.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2638.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2610.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 2504.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 2470.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.5
FF:10153-102I9 76 years, female 87.7
FF:10169-103B7 60 years, female 53.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 218.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 218.0
Samples: 4

Max nTPM: 297.4
Min nTPM: 156.8
Sample A Female 297.4
Sample B Female 176.6
Sample C Male 241.1
Sample D Male 156.8
Entorhinal cortex
nTPM: 192.9
Samples: 4

Max nTPM: 220.2
Min nTPM: 157.1
Sample A Female 179.6
Sample B Female 220.2
Sample C Male 214.8
Sample D Male 157.1
Subiculum
nTPM: 194.3
Samples: 4

Max nTPM: 288.7
Min nTPM: 159.0
Sample A Female 288.7
Sample B Female 165.9
Sample C Male 163.7
Sample D Male 159.0
Ventral hippocampus
nTPM: 184.4
Samples: 4

Max nTPM: 203.0
Min nTPM: 154.3
Sample A Female 203.0
Sample B Female 154.3
Sample C Male 180.9
Sample D Male 199.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1568.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1568.8
Samples: 4

Max nTPM: 1622.6
Min nTPM: 1480.6
Sample A Male 1566.2
Sample B Male 1480.6
Sample C Female 1622.6
Sample D Female 1605.8
Hippocampal formation
nTPM: 1499.6
Samples: 4

Max nTPM: 1733.6
Min nTPM: 1367.7
Sample A Male 1733.6
Sample B Male 1367.7
Sample C Female 1496.5
Sample D Female 1400.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.8
69816792 Antisense, RP_050510_01_H06, Mouse strain C57BL/6J (56 days, male) 11.8

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