HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:203.9 nTPM
HPA:203.9 nTPM
GTEx:293.0 nTPM
FANTOM5:479.3 Scaled Tags Per Million
Pig:185.5 nTPM
Mouse:187.2 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 203.9
Sample id Sample description nTPM
Hippocampus
nTPM: 141.0
1898 Male, age 80, left hemisphere 177.5
2621 Female, age 67, right hemisphere 167.2
1855 Male, age 76, left hemisphere 149.9
2148 Female, age 91, left hemisphere 126.1
1911 Female, age 85, right hemisphere 113.5
2529 Female, age 94, left hemisphere 112.0
Dentate gyrus
nTPM: 141.5
2530 Female, age 94, left hemisphere 166.0
1927 Female, age 91, both hemispheres 161.5
2246 Female, age 85, both hemispheres 141.9
2010 Male, age 76, both hemispheres 140.7
2528 Male, age 74, both hemispheres 122.0
2531 Female, age 67, both hemispheres 116.7
Entorhinal gyrus
nTPM: 158.5
2613 Female, age 94, left hemisphere 217.1
2764 Male, age 80, right hemisphere 168.8
1938 Female, age 85, left hemisphere 160.0
1787 Male, age 76, left hemisphere 156.1
2686 Male, age 75, right hemisphere 141.2
2117 Female, age 91, right hemisphere 107.8
Hippocampus, CA1
nTPM: 159.4
2749 Male, age 80, left hemisphere 251.2
2527 Male, age 74, both hemispheres 156.8
1873 Female, age 85, both hemispheres 143.6
2082 Female, age 91, right hemisphere 130.6
2045 Male, age 76, both hemispheres 114.9
Hippocampus, CA2
nTPM: 152.8
1892 Male, age 76, both hemispheres 189.3
1963 Male, age 80, left hemisphere 172.2
2437 Female, age 94, left hemisphere 165.0
2249 Male, age 74, both hemispheres 141.0
2113 Female, age 91, right hemisphere 130.8
1940 Female, age 85, left hemisphere 118.6
Hippocampus, CA3
nTPM: 144.8
2137 Male, age 80, left hemisphere 206.4
1867 Male, age 76, both hemispheres 152.5
2436 Male, age 74, both hemispheres 138.7
2861 Female, age 67, both hemispheres 126.7
2620 Female, age 94, left hemisphere 125.1
1891 Female, age 85, both hemispheres 119.4
Parahippocampal cortex
nTPM: 168.1
2245 Female, age 91, both hemispheres 212.6
1990 Female, age 91, right hemisphere 184.1
1850 Male, age 80, both hemispheres 181.2
2250 Female, age 67, right hemisphere 179.0
2693 Female, age 94, both hemispheres 170.1
2532 Female, age 72, left hemisphere 160.4
2622 Female, age 67, right hemisphere 159.7
1933 Female, age 85, both hemispheres 156.3
2692 Male, age 74, both hemispheres 142.7
2018 Male, age 76, both hemispheres 135.2
Perirhinal gyrus
nTPM: 203.9
1847 Female, age 91, left hemisphere 262.3
2521 Female, age 94, right hemisphere 225.9
1794 Male, age 80, right hemisphere 193.1
1841 Female, age 85, right hemisphere 181.7
2848 Male, age 76, right hemisphere 156.2
Subiculum
nTPM: 138.3
1901 Male, age 80, both hemispheres 162.0
2438 Female, age 94, left hemisphere 152.2
2619 Male, age 74, both hemispheres 150.5
1977 Female, age 85, both hemispheres 145.4
2042 Male, age 76, both hemispheres 119.1
2729 Female, age 91, right hemisphere 100.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 293.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 293.0
Samples: 197

Max nTPM: 956.6
Min nTPM: 26.9
Std nTPM: 196.4
Median nTPM: 234.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 956.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 943.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 805.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 786.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 771.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 726.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 701.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 700.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 687.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 668.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 662.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 479.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 479.3
FF:10169-103B7 60 years, female 771.1
FF:10153-102I9 76 years, female 187.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 185.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 143.0
Samples: 4

Max nTPM: 222.3
Min nTPM: 78.2
Sample A Female 222.3
Sample B Female 143.6
Sample C Male 127.7
Sample D Male 78.2
Entorhinal cortex
nTPM: 176.5
Samples: 4

Max nTPM: 224.0
Min nTPM: 149.2
Sample A Female 224.0
Sample B Female 149.2
Sample C Male 172.1
Sample D Male 160.6
Subiculum
nTPM: 185.5
Samples: 4

Max nTPM: 257.0
Min nTPM: 154.1
Sample A Female 257.0
Sample B Female 162.2
Sample C Male 168.8
Sample D Male 154.1
Ventral hippocampus
nTPM: 159.8
Samples: 4

Max nTPM: 206.5
Min nTPM: 93.1
Sample A Female 175.8
Sample B Female 93.1
Sample C Male 206.5
Sample D Male 163.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 187.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 187.2
Samples: 4

Max nTPM: 204.4
Min nTPM: 174.7
Sample A Male 174.7
Sample B Male 182.9
Sample C Female 186.8
Sample D Female 204.4
Hippocampal formation
nTPM: 164.5
Samples: 4

Max nTPM: 189.2
Min nTPM: 149.2
Sample A Male 189.2
Sample B Male 149.2
Sample C Female 157.0
Sample D Female 162.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
1210 Antisense, RP_040324_01_E03, Mouse strain C57BL/6J (56 days, male) 6.5
1209 Antisense, RP_040324_01_E03, Mouse strain C57BL/6J (56 days, male) 5.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.