HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:57.3 nTPM
HPA:57.3 nTPM
GTEx:45.0 nTPM
FANTOM5:62.8 Scaled Tags Per Million
Pig:9.8 nTPM
Mouse:33.7 nTPM
Allen mouse:11.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061593Antibody CAB016327
Glial cells HighMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.3
Sample id Sample description nTPM
Hippocampus
nTPM: 55.3
1855 Male, age 76, left hemisphere 59.8
2148 Female, age 91, left hemisphere 58.0
2621 Female, age 67, right hemisphere 54.9
1911 Female, age 85, right hemisphere 54.0
1898 Male, age 80, left hemisphere 53.0
2529 Female, age 94, left hemisphere 52.2
Dentate gyrus
nTPM: 56.1
2531 Female, age 67, both hemispheres 59.7
2010 Male, age 76, both hemispheres 59.6
2246 Female, age 85, both hemispheres 56.0
2528 Male, age 74, both hemispheres 54.8
1927 Female, age 91, both hemispheres 54.7
2530 Female, age 94, left hemisphere 51.8
Entorhinal gyrus
nTPM: 54.9
2613 Female, age 94, left hemisphere 56.0
1787 Male, age 76, left hemisphere 55.8
2764 Male, age 80, right hemisphere 55.5
2117 Female, age 91, right hemisphere 54.9
2686 Male, age 75, right hemisphere 54.6
1938 Female, age 85, left hemisphere 52.8
Hippocampus, CA1
nTPM: 57.3
2045 Male, age 76, both hemispheres 69.2
2082 Female, age 91, right hemisphere 56.2
1873 Female, age 85, both hemispheres 55.0
2527 Male, age 74, both hemispheres 54.3
2749 Male, age 80, left hemisphere 51.6
Hippocampus, CA2
nTPM: 55.3
1892 Male, age 76, both hemispheres 61.3
1940 Female, age 85, left hemisphere 56.4
2113 Female, age 91, right hemisphere 55.1
2437 Female, age 94, left hemisphere 53.9
2249 Male, age 74, both hemispheres 53.7
1963 Male, age 80, left hemisphere 51.1
Hippocampus, CA3
nTPM: 56.4
1867 Male, age 76, both hemispheres 60.7
2620 Female, age 94, left hemisphere 58.9
2436 Male, age 74, both hemispheres 56.8
2861 Female, age 67, both hemispheres 55.0
1891 Female, age 85, both hemispheres 54.7
2137 Male, age 80, left hemisphere 52.5
Parahippocampal cortex
nTPM: 56.0
2018 Male, age 76, both hemispheres 62.8
2693 Female, age 94, both hemispheres 57.1
2622 Female, age 67, right hemisphere 56.1
2532 Female, age 72, left hemisphere 55.5
1933 Female, age 85, both hemispheres 55.4
2250 Female, age 67, right hemisphere 55.1
2692 Male, age 74, both hemispheres 54.7
1850 Male, age 80, both hemispheres 54.6
2245 Female, age 91, both hemispheres 54.3
1990 Female, age 91, right hemisphere 53.8
Perirhinal gyrus
nTPM: 56.0
2848 Male, age 76, right hemisphere 58.0
2521 Female, age 94, right hemisphere 57.2
1841 Female, age 85, right hemisphere 56.2
1847 Female, age 91, left hemisphere 54.5
1794 Male, age 80, right hemisphere 54.0
Subiculum
nTPM: 56.0
2042 Male, age 76, both hemispheres 58.4
2438 Female, age 94, left hemisphere 57.0
2729 Female, age 91, right hemisphere 57.0
2619 Male, age 74, both hemispheres 55.1
1977 Female, age 85, both hemispheres 54.8
1901 Male, age 80, both hemispheres 53.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.0
Samples: 197

Max nTPM: 173.5
Min nTPM: 17.1
Std nTPM: 15.0
Median nTPM: 42.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 173.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 100.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 90.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 87.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 77.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 76.2
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 72.7
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 70.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 70.2
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 68.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 68.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.8
FF:10153-102I9 76 years, female 76.6
FF:10169-103B7 60 years, female 49.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 11.3
Min nTPM: 8.4
Sample A Female 11.3
Sample B Female 9.8
Sample C Male 9.7
Sample D Male 8.4
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.4
Sample A Female 10.3
Sample B Female 9.2
Sample C Male 9.0
Sample D Male 8.4
Subiculum
nTPM: 8.6
Samples: 4

Max nTPM: 10.7
Min nTPM: 7.6
Sample A Female 10.7
Sample B Female 8.1
Sample C Male 7.6
Sample D Male 7.8
Ventral hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 11.2
Min nTPM: 7.6
Sample A Female 10.1
Sample B Female 7.6
Sample C Male 11.2
Sample D Male 10.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.7
Samples: 4

Max nTPM: 32.9
Min nTPM: 22.6
Sample A Male 26.3
Sample B Male 32.9
Sample C Female 32.8
Sample D Female 22.6
Hippocampal formation
nTPM: 33.7
Samples: 4

Max nTPM: 36.2
Min nTPM: 30.1
Sample A Male 32.5
Sample B Male 36.0
Sample C Female 30.1
Sample D Female 36.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.6
356089 Antisense, RP_040617_02_C05, Mouse strain C57BL/6J (56 days, male) 13.1
71608387 Antisense, RP_050927_01_F04, Mouse strain C57BL/6J (56 days, male) 10.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.