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RPL29
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1155.7 nTPM
HPA:748.0 nTPM
GTEx:1155.7 nTPM
FANTOM5:207.1 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA069064
Glandular cells High



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 748.0
overview
Male, age 65
Small intestine sample 232
nTPM: 1020
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 757.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 524.3
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 690.2

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1155.7
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1155.7
Samples: 187

Max nTPM: 2205.5
Min nTPM: 695.4
Std nTPM: 278.7
Median nTPM: 1115.6
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2205.5
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2156.7
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2057.2
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 1909.7
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 1896.1
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1802.4
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1769.3
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1767.1
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 1751.9
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1703.7
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1692.4
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1681.1
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1666.5
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1642.0
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1640.3
GTEX-183FY-1626-SM-793D8 20-29 years, male 1603.3
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1595.0
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1548.4
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1547.2
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1518.6
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1496.8
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1494.2
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1483.9
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1474.7
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1474.0
GTEX-1192X-2526-SM-59868 50-59 years, male 1456.2
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1437.2
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1433.3
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1419.4
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1406.7
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1389.3
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1387.2
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1386.7
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1361.0
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1356.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1355.6
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1331.7
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1329.6
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1323.4
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1311.8
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1300.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1296.5
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1292.3
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1287.5
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1280.0
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1266.6
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1266.4
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1258.5
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1257.3
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1255.7
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1254.7
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1253.2
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1251.2
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1245.0
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1236.3
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1231.4
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1231.0
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1228.7
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1227.4
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1226.6
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1222.9
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1221.3
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1221.1
GTEX-1C475-1426-SM-793CH 40-49 years, female 1219.4
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1217.9
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1207.6
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1206.9
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1205.6
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1205.1
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1198.7
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1193.6
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1178.8
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1175.6
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1174.0
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1169.8
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1168.2
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1167.4
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1166.6
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1143.6
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1140.1
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1140.1
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1138.6
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1138.3
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1132.4
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1131.3
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1129.5
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1129.1
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1125.5
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1125.3
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1120.9
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1120.5
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1119.6
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1118.0
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1115.6
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1114.2
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1114.1
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1113.8
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1113.4
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1104.3
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1087.0
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1084.5
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1083.9
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1083.8
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1081.9
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1077.0
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1077.0
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1073.7
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1071.2
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1063.7
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1055.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1052.0
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1051.8
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1051.1
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1041.2
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1032.1
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1031.2
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1028.2
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1028.0
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1023.2
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1021.9
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1013.5
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1010.4
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1009.2
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1008.8
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1006.5
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 999.8
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 994.5
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 994.4
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 992.4
GTEX-111YS-1426-SM-5GID8 60-69 years, male 988.3
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 988.1
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 980.0
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 974.1
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 971.3
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 971.0
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 968.6
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 965.9
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 960.1
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 959.6
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 959.2
GTEX-13111-1426-SM-5DUW3 50-59 years, male 958.5
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 954.9
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 951.9
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 942.1
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 940.1
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 938.0
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 932.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 929.9
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 929.1
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 925.3
GTEX-144GM-1026-SM-79OKU 20-29 years, male 917.3
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 912.8
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 907.2
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 906.3
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 895.0
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 892.1
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 890.6
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 889.3
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 888.7
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 884.7
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 883.5
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 882.9
GTEX-14PN3-2026-SM-68729 60-69 years, female 880.0
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 874.9
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 869.4
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 865.5
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 865.1
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 860.1
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 857.9
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 845.3
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 844.2
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 841.0
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 836.2
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 836.0
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 831.2
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 826.1
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 810.2
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 809.1
GTEX-YFCO-1326-SM-664NV 40-49 years, male 802.5
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 801.3
GTEX-1122O-1326-SM-5H11F 60-69 years, female 788.3
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 785.3
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 785.0
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 779.4
GTEX-ZTSS-0926-SM-59865 40-49 years, male 765.3
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 733.2
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 695.4
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 207.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 207.1
FF:10024-101D6 15,40,85 years, mixed 207.1

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