HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:88.3 nTPM
HPA:88.3 nTPM
GTEx:53.6 nTPM
FANTOM5:191.4 Scaled Tags Per Million
Pig:127.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA072751
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 88.3
Sample id Sample description nTPM
Hippocampus
nTPM: 88.3
2529 Female, age 94, left hemisphere 99.3
1911 Female, age 85, right hemisphere 98.3
2148 Female, age 91, left hemisphere 97.5
1898 Male, age 80, left hemisphere 83.3
1855 Male, age 76, left hemisphere 79.1
2621 Female, age 67, right hemisphere 72.1
Dentate gyrus
nTPM: 76.6
2528 Male, age 74, both hemispheres 107.7
2246 Female, age 85, both hemispheres 82.5
1927 Female, age 91, both hemispheres 74.8
2530 Female, age 94, left hemisphere 70.5
2010 Male, age 76, both hemispheres 67.8
2531 Female, age 67, both hemispheres 56.5
Entorhinal gyrus
nTPM: 78.1
2117 Female, age 91, right hemisphere 114.4
1938 Female, age 85, left hemisphere 84.3
1787 Male, age 76, left hemisphere 73.5
2764 Male, age 80, right hemisphere 71.0
2686 Male, age 75, right hemisphere 65.2
2613 Female, age 94, left hemisphere 60.3
Hippocampus, CA1
nTPM: 80.5
2527 Male, age 74, both hemispheres 109.4
1873 Female, age 85, both hemispheres 93.7
2082 Female, age 91, right hemisphere 79.4
2749 Male, age 80, left hemisphere 61.5
2045 Male, age 76, both hemispheres 58.6
Hippocampus, CA2
nTPM: 79.0
2249 Male, age 74, both hemispheres 103.7
2113 Female, age 91, right hemisphere 91.8
2437 Female, age 94, left hemisphere 75.3
1940 Female, age 85, left hemisphere 74.5
1963 Male, age 80, left hemisphere 72.4
1892 Male, age 76, both hemispheres 56.4
Hippocampus, CA3
nTPM: 74.3
1891 Female, age 85, both hemispheres 91.8
2436 Male, age 74, both hemispheres 88.7
2620 Female, age 94, left hemisphere 71.7
2861 Female, age 67, both hemispheres 67.5
2137 Male, age 80, left hemisphere 65.2
1867 Male, age 76, both hemispheres 60.9
Parahippocampal cortex
nTPM: 75.0
2692 Male, age 74, both hemispheres 92.7
1933 Female, age 85, both hemispheres 82.7
2250 Female, age 67, right hemisphere 78.1
1990 Female, age 91, right hemisphere 78.0
2245 Female, age 91, both hemispheres 76.2
2622 Female, age 67, right hemisphere 76.1
1850 Male, age 80, both hemispheres 72.2
2693 Female, age 94, both hemispheres 68.3
2532 Female, age 72, left hemisphere 65.0
2018 Male, age 76, both hemispheres 61.0
Perirhinal gyrus
nTPM: 72.9
1794 Male, age 80, right hemisphere 81.4
1841 Female, age 85, right hemisphere 76.5
1847 Female, age 91, left hemisphere 74.6
2521 Female, age 94, right hemisphere 74.4
2848 Male, age 76, right hemisphere 57.5
Subiculum
nTPM: 85.6
2619 Male, age 74, both hemispheres 111.9
2729 Female, age 91, right hemisphere 108.0
1977 Female, age 85, both hemispheres 78.5
2438 Female, age 94, left hemisphere 74.2
1901 Male, age 80, both hemispheres 71.6
2042 Male, age 76, both hemispheres 69.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.6
Samples: 197

Max nTPM: 146.0
Min nTPM: 11.9
Std nTPM: 25.5
Median nTPM: 48.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 146.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 134.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 131.4
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 123.2
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 119.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 118.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 117.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 114.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 112.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 107.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 105.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 191.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 191.4
FF:10153-102I9 76 years, female 291.9
FF:10169-103B7 60 years, female 91.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 127.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 87.4
Samples: 4

Max nTPM: 93.7
Min nTPM: 78.7
Sample A Female 88.6
Sample B Female 78.7
Sample C Male 93.7
Sample D Male 88.4
Entorhinal cortex
nTPM: 109.6
Samples: 4

Max nTPM: 123.2
Min nTPM: 96.8
Sample A Female 103.6
Sample B Female 114.8
Sample C Male 123.2
Sample D Male 96.8
Subiculum
nTPM: 127.8
Samples: 4

Max nTPM: 158.7
Min nTPM: 109.1
Sample A Female 158.7
Sample B Female 128.0
Sample C Male 115.2
Sample D Male 109.1
Ventral hippocampus
nTPM: 100.1
Samples: 4

Max nTPM: 128.0
Min nTPM: 85.8
Sample A Female 90.0
Sample B Female 96.7
Sample C Male 128.0
Sample D Male 85.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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