COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: High
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:44.7 nTPM
HPA:6.8 nTPM
GTEx:44.7 nTPM
FANTOM5:18.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA051364
Endothelial cells Low
Glandular cells High
Peripheral nerve/ganglion Not detected


COLON - HPA RNA-seqi
Average nTPM 6.8
overview
Male, age 54 		Colon sample 67
nTPM: 10.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 7.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 6.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 6.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 8.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 3.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 8.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 4.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 5.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 9.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 6.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 44.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 44.7
Samples: 373

Max nTPM: 98.0
Min nTPM: 8.3
Std nTPM: 15.1
Median nTPM: 44.3
GTEX-14E1K-1626-SM-664MO 50-59 years, male 98.0
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 89.0
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 85.9
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 85.5
GTEX-1J8Q3-2426-SM-CL53S 60-69 years, male 82.6
GTEX-1B8KE-1526-SM-7DUG2 50-59 years, male 81.5
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 81.3
GTEX-1J8QM-1226-SM-CY8HI 60-69 years, female 81.1
GTEX-1MGNQ-2126-SM-EV7AC 40-49 years, male 80.5
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 79.3
GTEX-1IDJU-1926-SM-CL53W 60-69 years, female 74.7
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Colon - Transverse
Average nTPM: 23.0
Samples: 406

Max nTPM: 94.0
Min nTPM: 5.7
Std nTPM: 13.9
Median nTPM: 20.2
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 94.0
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 71.8
GTEX-14E1K-1826-SM-793DT 50-59 years, male 67.2
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 62.7
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 60.7
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 58.9
GTEX-1IDJF-1826-SM-CKZOE 20-29 years, male 57.7
GTEX-ZF29-1726-SM-4WKFV 60-69 years, female 57.5
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 56.7
GTEX-OXRO-0726-SM-E9U4C 60-69 years, female 56.5
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 54.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 18.5
FF:10014-101C5 62,83,84 years, mixed 18.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.