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CAMK2N1
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  • CAMK2N1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:202.6 nTPM
FANTOM5:474.7 Scaled Tags Per Million
Pig:297.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA075200
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 202.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 202.6
Samples: 246

Max nTPM: 763.9
Min nTPM: 44.8
Std nTPM: 100.9
Median nTPM: 187.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 763.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 722.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 603.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 524.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 426.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 419.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 394.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 393.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 388.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 379.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 377.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 372.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 363.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 362.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 361.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 357.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 347.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 342.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 334.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 330.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 325.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 320.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 320.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 319.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 318.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 314.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 312.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 311.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 307.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 305.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 302.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 302.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 300.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 298.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 296.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 295.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 292.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 287.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 285.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 281.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 279.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 279.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 277.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 277.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 275.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 274.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 274.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 271.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 269.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 269.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 268.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 268.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 268.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 267.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 266.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 263.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 263.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 262.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 262.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 259.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 257.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 256.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 254.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 252.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 252.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 251.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 251.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 250.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 250.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 249.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 247.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 247.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 244.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 244.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 244.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 243.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 243.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 240.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 237.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 237.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 235.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 235.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 232.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 231.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 229.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 227.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 227.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 226.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 225.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 222.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 221.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 219.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 219.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 217.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 215.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 213.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 212.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 211.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 211.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 209.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 208.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 207.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 207.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 206.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 205.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 204.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 204.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 204.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 202.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 200.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 199.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 198.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 195.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 195.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 195.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 194.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 194.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 194.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 194.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 193.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 189.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 188.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 188.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 186.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 185.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 184.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 183.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 183.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 183.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 182.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 180.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 179.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 178.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 176.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 176.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 176.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 176.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 175.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 175.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 174.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 173.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 173.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 171.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 170.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 169.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 169.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 167.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 166.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 166.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 165.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 162.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 161.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 158.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 157.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 155.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 154.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 153.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 153.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 153.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 151.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 150.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 148.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 147.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 147.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 146.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 146.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 145.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 144.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 141.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 139.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 138.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 137.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 137.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 136.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 136.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 136.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 136.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 136.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 133.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 133.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 132.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 130.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 129.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 129.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 129.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 128.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 127.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 126.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 124.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 124.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 122.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 122.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 120.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 117.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 117.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 117.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 116.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 116.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 114.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 113.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 113.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 112.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 112.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 112.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 111.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 111.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 110.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 109.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 109.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 108.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 107.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 107.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 106.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 106.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 105.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 103.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 101.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 101.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 99.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 98.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 98.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 97.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 94.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 94.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 93.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 93.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 91.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 89.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 87.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 83.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 83.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 81.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 79.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 77.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 76.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 75.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 73.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 72.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 70.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 70.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 69.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 65.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 63.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 58.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 58.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 44.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 474.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 474.7
FF:10164-103B2 76 years, female 474.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 297.5
Pig sample Sample description nTPM
Caudate
nTPM: 297.5
Samples: 4

Max nTPM: 374.3
Min nTPM: 239.1
Sample A Female 318.3
Sample B Female 239.1
Sample C Male 374.3
Sample D Male 258.3

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