HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:7.1 nTPM
HPA:7.1 nTPM
GTEx:15.5 nTPM
FANTOM5:53.9 Scaled Tags Per Million
Pig:37.0 nTPM
Mouse:17.4 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028461Antibody HPA028466
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.1
Sample id Sample description nTPM
Hippocampus
nTPM: 5.4
1911 Female, age 85, right hemisphere 6.9
1898 Male, age 80, left hemisphere 5.7
2148 Female, age 91, left hemisphere 5.6
1855 Male, age 76, left hemisphere 5.2
2529 Female, age 94, left hemisphere 5.0
2621 Female, age 67, right hemisphere 4.0
Dentate gyrus
nTPM: 6.4
2010 Male, age 76, both hemispheres 7.7
1927 Female, age 91, both hemispheres 7.5
2530 Female, age 94, left hemisphere 6.5
2246 Female, age 85, both hemispheres 6.1
2531 Female, age 67, both hemispheres 5.7
2528 Male, age 74, both hemispheres 4.7
Entorhinal gyrus
nTPM: 5.0
1938 Female, age 85, left hemisphere 6.1
2117 Female, age 91, right hemisphere 5.6
2686 Male, age 75, right hemisphere 5.1
2613 Female, age 94, left hemisphere 4.8
2764 Male, age 80, right hemisphere 4.4
1787 Male, age 76, left hemisphere 4.0
Hippocampus, CA1
nTPM: 7.1
2045 Male, age 76, both hemispheres 11.0
1873 Female, age 85, both hemispheres 7.4
2749 Male, age 80, left hemisphere 6.4
2082 Female, age 91, right hemisphere 6.0
2527 Male, age 74, both hemispheres 4.8
Hippocampus, CA2
nTPM: 5.5
1892 Male, age 76, both hemispheres 7.1
2113 Female, age 91, right hemisphere 5.7
1963 Male, age 80, left hemisphere 5.4
2249 Male, age 74, both hemispheres 5.0
1940 Female, age 85, left hemisphere 4.9
2437 Female, age 94, left hemisphere 4.6
Hippocampus, CA3
nTPM: 6.0
1867 Male, age 76, both hemispheres 7.8
1891 Female, age 85, both hemispheres 7.1
2137 Male, age 80, left hemisphere 6.6
2620 Female, age 94, left hemisphere 5.4
2436 Male, age 74, both hemispheres 4.7
2861 Female, age 67, both hemispheres 4.4
Parahippocampal cortex
nTPM: 5.2
1933 Female, age 85, both hemispheres 6.3
1850 Male, age 80, both hemispheres 5.9
2245 Female, age 91, both hemispheres 5.7
1990 Female, age 91, right hemisphere 5.5
2693 Female, age 94, both hemispheres 5.4
2018 Male, age 76, both hemispheres 5.3
2250 Female, age 67, right hemisphere 5.1
2532 Female, age 72, left hemisphere 4.7
2692 Male, age 74, both hemispheres 4.4
2622 Female, age 67, right hemisphere 3.2
Perirhinal gyrus
nTPM: 5.4
2848 Male, age 76, right hemisphere 6.1
1841 Female, age 85, right hemisphere 5.7
1794 Male, age 80, right hemisphere 5.1
1847 Female, age 91, left hemisphere 5.0
2521 Female, age 94, right hemisphere 4.9
Subiculum
nTPM: 5.4
2042 Male, age 76, both hemispheres 6.6
1901 Male, age 80, both hemispheres 6.5
2729 Female, age 91, right hemisphere 5.4
2438 Female, age 94, left hemisphere 5.3
1977 Female, age 85, both hemispheres 5.2
2619 Male, age 74, both hemispheres 3.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.5
Samples: 197

Max nTPM: 40.1
Min nTPM: 6.0
Std nTPM: 5.9
Median nTPM: 14.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 40.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 39.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 37.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 35.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 29.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 29.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 29.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 28.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 28.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 27.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 26.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.9
FF:10153-102I9 76 years, female 58.6
FF:10169-103B7 60 years, female 49.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 37.0
Samples: 4

Max nTPM: 45.0
Min nTPM: 25.5
Sample A Female 45.0
Sample B Female 33.4
Sample C Male 44.1
Sample D Male 25.5
Entorhinal cortex
nTPM: 28.1
Samples: 4

Max nTPM: 32.0
Min nTPM: 24.0
Sample A Female 25.7
Sample B Female 32.0
Sample C Male 24.0
Sample D Male 30.6
Subiculum
nTPM: 29.5
Samples: 4

Max nTPM: 33.0
Min nTPM: 27.5
Sample A Female 33.0
Sample B Female 29.7
Sample C Male 27.5
Sample D Male 27.6
Ventral hippocampus
nTPM: 30.5
Samples: 4

Max nTPM: 38.0
Min nTPM: 25.6
Sample A Female 30.5
Sample B Female 25.6
Sample C Male 28.0
Sample D Male 38.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 18.7
Min nTPM: 15.2
Sample A Male 15.2
Sample B Male 18.7
Sample C Female 18.4
Sample D Female 17.5
Hippocampal formation
nTPM: 16.3
Samples: 4

Max nTPM: 16.8
Min nTPM: 15.8
Sample A Male 16.1
Sample B Male 16.5
Sample C Female 16.8
Sample D Female 15.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70474071 Antisense, RP_050614_04_H02, Mouse strain C57BL/6J (56 days, male) 0.2

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