HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:106.0 nTPM
HPA:106.0 nTPM
GTEx:114.0 nTPM
FANTOM5:73.8 Scaled Tags Per Million
Pig:58.6 nTPM
Mouse:114.0 nTPM
Allen mouse:15.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011917Antibody HPA075970
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 106.0
Sample id Sample description nTPM
Hippocampus
nTPM: 82.5
1898 Male, age 80, left hemisphere 90.9
1911 Female, age 85, right hemisphere 84.3
2621 Female, age 67, right hemisphere 83.5
2148 Female, age 91, left hemisphere 81.3
2529 Female, age 94, left hemisphere 77.7
1855 Male, age 76, left hemisphere 77.4
Dentate gyrus
nTPM: 92.2
2531 Female, age 67, both hemispheres 108.2
2530 Female, age 94, left hemisphere 101.8
2246 Female, age 85, both hemispheres 91.3
2528 Male, age 74, both hemispheres 86.9
1927 Female, age 91, both hemispheres 83.0
2010 Male, age 76, both hemispheres 81.7
Entorhinal gyrus
nTPM: 106.0
2613 Female, age 94, left hemisphere 122.0
2764 Male, age 80, right hemisphere 118.7
1787 Male, age 76, left hemisphere 105.3
2117 Female, age 91, right hemisphere 99.3
1938 Female, age 85, left hemisphere 97.5
2686 Male, age 75, right hemisphere 93.1
Hippocampus, CA1
nTPM: 84.1
2045 Male, age 76, both hemispheres 91.5
1873 Female, age 85, both hemispheres 85.2
2082 Female, age 91, right hemisphere 81.9
2749 Male, age 80, left hemisphere 81.6
2527 Male, age 74, both hemispheres 80.1
Hippocampus, CA2
nTPM: 84.4
2437 Female, age 94, left hemisphere 93.2
1963 Male, age 80, left hemisphere 84.7
1892 Male, age 76, both hemispheres 84.4
1940 Female, age 85, left hemisphere 83.4
2249 Male, age 74, both hemispheres 81.8
2113 Female, age 91, right hemisphere 78.9
Hippocampus, CA3
nTPM: 91.2
2620 Female, age 94, left hemisphere 133.1
1891 Female, age 85, both hemispheres 95.5
2861 Female, age 67, both hemispheres 90.8
1867 Male, age 76, both hemispheres 80.8
2137 Male, age 80, left hemisphere 80.7
2436 Male, age 74, both hemispheres 66.1
Parahippocampal cortex
nTPM: 93.4
1990 Female, age 91, right hemisphere 101.6
2532 Female, age 72, left hemisphere 101.1
2693 Female, age 94, both hemispheres 100.5
1850 Male, age 80, both hemispheres 98.4
1933 Female, age 85, both hemispheres 94.6
2622 Female, age 67, right hemisphere 92.9
2245 Female, age 91, both hemispheres 92.4
2692 Male, age 74, both hemispheres 87.8
2018 Male, age 76, both hemispheres 82.7
2250 Female, age 67, right hemisphere 82.0
Perirhinal gyrus
nTPM: 101.9
1794 Male, age 80, right hemisphere 113.7
2848 Male, age 76, right hemisphere 103.7
2521 Female, age 94, right hemisphere 99.5
1847 Female, age 91, left hemisphere 96.6
1841 Female, age 85, right hemisphere 96.0
Subiculum
nTPM: 89.9
1977 Female, age 85, both hemispheres 109.5
1901 Male, age 80, both hemispheres 92.9
2042 Male, age 76, both hemispheres 92.5
2619 Male, age 74, both hemispheres 86.5
2729 Female, age 91, right hemisphere 82.3
2438 Female, age 94, left hemisphere 75.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 114.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 114.0
Samples: 197

Max nTPM: 245.2
Min nTPM: 35.6
Std nTPM: 34.2
Median nTPM: 112.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 245.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 224.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 220.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 208.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 206.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 188.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 183.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 183.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 173.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 166.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 161.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.8
FF:10169-103B7 60 years, female 79.5
FF:10153-102I9 76 years, female 68.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.6
Samples: 4

Max nTPM: 81.7
Min nTPM: 42.8
Sample A Female 81.7
Sample B Female 56.8
Sample C Male 53.2
Sample D Male 42.8
Entorhinal cortex
nTPM: 36.8
Samples: 4

Max nTPM: 43.2
Min nTPM: 33.3
Sample A Female 43.2
Sample B Female 35.8
Sample C Male 34.8
Sample D Male 33.3
Subiculum
nTPM: 35.1
Samples: 4

Max nTPM: 48.2
Min nTPM: 26.4
Sample A Female 48.2
Sample B Female 29.8
Sample C Male 35.9
Sample D Male 26.4
Ventral hippocampus
nTPM: 46.8
Samples: 4

Max nTPM: 54.9
Min nTPM: 30.5
Sample A Female 49.1
Sample B Female 30.5
Sample C Male 54.9
Sample D Male 52.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 114.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 114.0
Samples: 4

Max nTPM: 119.1
Min nTPM: 106.0
Sample A Male 119.1
Sample B Male 117.9
Sample C Female 106.0
Sample D Female 113.0
Hippocampal formation
nTPM: 107.4
Samples: 4

Max nTPM: 120.0
Min nTPM: 93.2
Sample A Male 93.2
Sample B Male 108.3
Sample C Female 107.9
Sample D Female 120.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.2
68797507 Antisense, RP_050210_02_D01, Mouse strain C57BL/6J (56 days, male) 15.2

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