HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:884.6 nTPM
HPA:884.6 nTPM
GTEx:607.9 nTPM
FANTOM5:1118.5 Scaled Tags Per Million
Pig:475.8 nTPM
Mouse:514.8 nTPM
Allen mouse:19.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA070820
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 884.6
Sample id Sample description nTPM
Hippocampus
nTPM: 805.8
1855 Male, age 76, left hemisphere 888.6
1898 Male, age 80, left hemisphere 839.5
2529 Female, age 94, left hemisphere 799.2
2621 Female, age 67, right hemisphere 783.6
2148 Female, age 91, left hemisphere 766.3
1911 Female, age 85, right hemisphere 757.7
Dentate gyrus
nTPM: 796.5
2246 Female, age 85, both hemispheres 848.4
2010 Male, age 76, both hemispheres 845.5
2530 Female, age 94, left hemisphere 838.5
2531 Female, age 67, both hemispheres 774.2
2528 Male, age 74, both hemispheres 755.8
1927 Female, age 91, both hemispheres 716.5
Entorhinal gyrus
nTPM: 814.3
2764 Male, age 80, right hemisphere 849.9
1787 Male, age 76, left hemisphere 839.8
2686 Male, age 75, right hemisphere 830.4
1938 Female, age 85, left hemisphere 820.6
2117 Female, age 91, right hemisphere 781.1
2613 Female, age 94, left hemisphere 763.9
Hippocampus, CA1
nTPM: 794.4
2045 Male, age 76, both hemispheres 882.0
1873 Female, age 85, both hemispheres 816.6
2082 Female, age 91, right hemisphere 776.9
2527 Male, age 74, both hemispheres 761.1
2749 Male, age 80, left hemisphere 735.2
Hippocampus, CA2
nTPM: 774.6
1940 Female, age 85, left hemisphere 822.5
1892 Male, age 76, both hemispheres 783.6
2437 Female, age 94, left hemisphere 772.3
2113 Female, age 91, right hemisphere 766.9
1963 Male, age 80, left hemisphere 765.5
2249 Male, age 74, both hemispheres 736.5
Hippocampus, CA3
nTPM: 766.3
2861 Female, age 67, both hemispheres 821.1
2620 Female, age 94, left hemisphere 812.5
1891 Female, age 85, both hemispheres 776.8
1867 Male, age 76, both hemispheres 766.4
2137 Male, age 80, left hemisphere 713.9
2436 Male, age 74, both hemispheres 707.4
Parahippocampal cortex
nTPM: 817.2
1850 Male, age 80, both hemispheres 886.0
2018 Male, age 76, both hemispheres 867.0
1933 Female, age 85, both hemispheres 864.5
2622 Female, age 67, right hemisphere 817.7
2532 Female, age 72, left hemisphere 817.5
2250 Female, age 67, right hemisphere 804.3
2693 Female, age 94, both hemispheres 802.5
2245 Female, age 91, both hemispheres 791.0
2692 Male, age 74, both hemispheres 788.8
1990 Female, age 91, right hemisphere 732.7
Perirhinal gyrus
nTPM: 884.6
2848 Male, age 76, right hemisphere 920.8
1794 Male, age 80, right hemisphere 912.6
1841 Female, age 85, right hemisphere 898.4
1847 Female, age 91, left hemisphere 850.7
2521 Female, age 94, right hemisphere 840.5
Subiculum
nTPM: 777.6
1977 Female, age 85, both hemispheres 810.1
2042 Male, age 76, both hemispheres 799.0
2729 Female, age 91, right hemisphere 775.3
2619 Male, age 74, both hemispheres 772.8
2438 Female, age 94, left hemisphere 767.9
1901 Male, age 80, both hemispheres 740.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 607.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 607.9
Samples: 197

Max nTPM: 1586.1
Min nTPM: 198.0
Std nTPM: 148.9
Median nTPM: 589.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1586.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1161.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1070.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1045.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 957.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 898.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 884.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 866.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 851.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 838.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 838.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1118.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1118.5
FF:10169-103B7 60 years, female 1257.7
FF:10153-102I9 76 years, female 979.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 475.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 475.8
Samples: 4

Max nTPM: 679.9
Min nTPM: 276.4
Sample A Female 679.9
Sample B Female 442.3
Sample C Male 504.5
Sample D Male 276.4
Entorhinal cortex
nTPM: 385.5
Samples: 4

Max nTPM: 416.7
Min nTPM: 336.7
Sample A Female 394.0
Sample B Female 394.5
Sample C Male 416.7
Sample D Male 336.7
Subiculum
nTPM: 422.7
Samples: 4

Max nTPM: 565.2
Min nTPM: 364.0
Sample A Female 565.2
Sample B Female 396.5
Sample C Male 364.0
Sample D Male 365.0
Ventral hippocampus
nTPM: 446.1
Samples: 4

Max nTPM: 519.3
Min nTPM: 345.8
Sample A Female 491.6
Sample B Female 345.8
Sample C Male 519.3
Sample D Male 427.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 514.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 514.8
Samples: 4

Max nTPM: 543.0
Min nTPM: 494.7
Sample A Male 494.7
Sample B Male 497.1
Sample C Female 524.4
Sample D Female 543.0
Hippocampal formation
nTPM: 497.4
Samples: 4

Max nTPM: 569.0
Min nTPM: 462.2
Sample A Male 569.0
Sample B Male 462.2
Sample C Female 486.4
Sample D Female 471.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.6
68193012 Antisense, RP_040928_01_B12, Mouse strain C57BL/6J (56 days, male) 24.5
70928292 Antisense, RP_050725_02_C07, Mouse strain C57BL/6J (56 days, male) 17.5
77414654 Antisense, RP_070205_01_H12, Mouse strain C57BL/6J (56 days, male) 16.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.