COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.3 nTPM
HPA:10.2 nTPM
GTEx:20.3 nTPM
FANTOM5:50.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA026427Antibody HPA026442Antibody HPA026526
Endothelial cells LowMediumMedium
Glandular cells Not detectedLowNot detected
Peripheral nerve/ganglion Not detectedLowMedium





COLON - HPA RNA-seqi
Average nTPM 10.2
overview
Male, age 54 		Colon sample 67
nTPM: 13.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 9.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 5.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 15.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 7.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 12.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 4.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 10.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 5.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 17
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 6.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 17.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 20.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 20.3
Samples: 373

Max nTPM: 62.4
Min nTPM: 3.3
Std nTPM: 9.8
Median nTPM: 18.6
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 62.4
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 61.9
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 56.8
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 55.3
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 53.1
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 48.7
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 48.1
GTEX-1LSNL-1626-SM-E9TJY 50-59 years, male 47.2
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 45.6
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 45.2
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 44.0
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Colon - Transverse
Average nTPM: 17.7
Samples: 406

Max nTPM: 71.5
Min nTPM: 2.8
Std nTPM: 7.5
Median nTPM: 16.9
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 71.5
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 51.7
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 47.4
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 43.7
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 41.7
GTEX-1IGQW-2326-SM-CE6RV 60-69 years, male 40.8
GTEX-XYKS-2226-SM-4E3IU 60-69 years, female 39.7
GTEX-17F96-2026-SM-79ON4 70-79 years, male 38.4
GTEX-QLQ7-1126-SM-CYPRB 60-69 years, male 35.7
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 34.0
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 33.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 50.3
FF:10014-101C5 62,83,84 years, mixed 50.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.