COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:50.3 nTPM
HPA:37.5 nTPM
GTEx:50.3 nTPM
FANTOM5:114.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA063708Antibody HPA064435Antibody CAB010297
Endothelial cells LowMediumMedium
Glandular cells MediumLowHigh
Peripheral nerve/ganglion LowLowMedium





COLON - HPA RNA-seqi
Average nTPM 37.5
overview
Male, age 54 		Colon sample 67
nTPM: 41.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 32.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 36.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 28.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 33.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 40.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 33.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 40.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 43.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 41.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 39.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 34.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 41.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 50.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 49.9
Samples: 373

Max nTPM: 163.9
Min nTPM: 25.4
Std nTPM: 16.1
Median nTPM: 45.8
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 163.9
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 132.3
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 113.8
GTEX-15ER7-2826-SM-6PAN2 20-29 years, female 112.5
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 104.2
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 101.4
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 100.6
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 99.7
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 99.5
GTEX-144GM-1126-SM-79OJK 20-29 years, male 96.7
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 95.8
Show allShow less
Colon - Transverse
Average nTPM: 50.3
Samples: 406

Max nTPM: 152.4
Min nTPM: 27.3
Std nTPM: 14.9
Median nTPM: 47.1
GTEX-14JIY-3326-SM-6871E 60-69 years, male 152.4
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 145.7
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 130.4
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 128.2
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 115.7
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 93.8
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 90.8
GTEX-1K9T9-2826-SM-D4P3F 50-59 years, female 90.3
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 88.8
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 86.9
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 85.7
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 114.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 114.1
FF:10014-101C5 62,83,84 years, mixed 114.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.