HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:105.8 nTPM
HPA:105.8 nTPM
GTEx:200.6 nTPM
FANTOM5:519.7 Scaled Tags Per Million
Pig:452.8 nTPM
Mouse:710.7 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 105.8
Sample id Sample description nTPM
Hippocampus
nTPM: 0.0
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
Dentate gyrus
nTPM: 0.0
1927 Female, age 91, both hemispheres 0.0
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 18.1
2613 Female, age 94, left hemisphere 47.3
2764 Male, age 80, right hemisphere 35.7
2686 Male, age 75, right hemisphere 18.4
1938 Female, age 85, left hemisphere 7.1
1787 Male, age 76, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 0.0
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 0.0
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 0.0
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
2620 Female, age 94, left hemisphere 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 39.1
2622 Female, age 67, right hemisphere 122.2
2693 Female, age 94, both hemispheres 78.1
1850 Male, age 80, both hemispheres 65.6
2245 Female, age 91, both hemispheres 49.5
1990 Female, age 91, right hemisphere 44.9
2532 Female, age 72, left hemisphere 18.1
1933 Female, age 85, both hemispheres 13.1
2018 Male, age 76, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 105.8
1841 Female, age 85, right hemisphere 143.3
1847 Female, age 91, left hemisphere 140.1
1794 Male, age 80, right hemisphere 109.1
2521 Female, age 94, right hemisphere 105.7
2848 Male, age 76, right hemisphere 30.9
Subiculum
nTPM: 5.0
2438 Female, age 94, left hemisphere 30.2
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 200.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 200.6
Samples: 197

Max nTPM: 1235.5
Min nTPM: 6.5
Std nTPM: 214.5
Median nTPM: 132.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1235.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 980.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 936.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 913.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 850.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 831.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 809.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 792.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 763.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 749.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 674.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 519.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 519.7
FF:10169-103B7 60 years, female 666.5
FF:10153-102I9 76 years, female 372.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 452.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 199.2
Samples: 4

Max nTPM: 411.4
Min nTPM: 73.2
Sample A Female 168.3
Sample B Female 144.0
Sample C Male 411.4
Sample D Male 73.2
Entorhinal cortex
nTPM: 452.8
Samples: 4

Max nTPM: 499.7
Min nTPM: 429.2
Sample A Female 499.7
Sample B Female 442.6
Sample C Male 429.2
Sample D Male 439.8
Subiculum
nTPM: 290.4
Samples: 4

Max nTPM: 438.2
Min nTPM: 212.5
Sample A Female 438.2
Sample B Female 274.2
Sample C Male 236.6
Sample D Male 212.5
Ventral hippocampus
nTPM: 200.9
Samples: 4

Max nTPM: 279.1
Min nTPM: 123.6
Sample A Female 279.1
Sample B Female 147.7
Sample C Male 253.0
Sample D Male 123.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 710.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 710.7
Samples: 4

Max nTPM: 786.7
Min nTPM: 653.8
Sample A Male 743.9
Sample B Male 786.7
Sample C Female 653.8
Sample D Female 658.5
Hippocampal formation
nTPM: 467.0
Samples: 4

Max nTPM: 534.0
Min nTPM: 435.4
Sample A Male 534.0
Sample B Male 435.4
Sample C Female 441.4
Sample D Female 457.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
1106 Antisense, RP_Baylor_103157, Mouse strain C57BL/6J (56 days, male) 6.6
1107 Antisense, RP_Baylor_103157, Mouse strain C57BL/6J (56 days, male) 3.8

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The Human Protein Atlas

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