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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 674.9
Min nTPM: 64.6
Std nTPM: 128.3
Median nTPM:
2_1
77 years, female
674.9
117_1
61 years, male
579.4
6_1
73 years, female
564.5
17_1
71 years, male
553.7
4_1
88 years, female
535.6
119_1
70 years, female
531.6
145_1
84 years, male
525.0
162_1
79 years, female
506.0
35_1
74 years, female
490.0
99_1
64 years, male
483.2
126_1
63 years, male
476.3
142_1
61 years, female
475.6
139_1
64 years, female
470.6
137_1
83 years, male
459.1
89_1
63 years, male
456.7
42_1
85 years, male
455.9
120_1
70 years, female
454.8
9_1
66 years, female
443.7
115_1
83 years, male
430.9
153_1
70 years, female
421.3
109_1
81 years, female
412.3
18_1
88 years, male
404.6
32_1
67 years, male
383.3
81_1
67 years, male
350.8
43_1
64 years, female
349.5
322_1
76 years, male
336.4
149_1
88 years, male
310.8
315_1
62 years, female
295.4
495_1
57 years, female
290.3
311_1
78 years, male
283.9
490_1
67 years, female
282.3
293_1
68 years, female
281.6
319_1
81 years, male
281.2
320_1
89 years, female
277.4
503_1
68 years, male
275.5
218_1
71 years, female
274.1
307_1
66 years, female
265.9
506_1
65 years, male
258.7
499_1
55 years, female
255.2
348_1
84 years, male
254.7
356_1
87 years, female
250.5
351_1
91 years, male
248.9
217_1
76 years, male
248.6
491_1
89 years, female
247.4
447_1
81 years, male
246.0
243_1
75 years, male
244.4
317_1
60 years, male
243.7
316_1
62 years, male
240.5
517_1
88 years, male
240.1
321_1
62 years, female
237.2
480_1
63 years, male
236.2
526_1
61 years, male
235.8
352_1
62 years, male
235.7
173_1
67 years, male
234.4
518_1
75 years, female
232.0
314_1
67 years, male
231.1
386_1
76 years, male
230.6
291_1
76 years, male
230.4
350_1
84 years, female
227.6
353_1
82 years, female
227.0
468_1
89 years, male
226.0
254_1
77 years, female
224.9
354_1
81 years, female
220.6
251_1
78 years, male
212.9
415_1
77 years, female
211.9
335_1
73 years, female
211.2
172_1
72 years, female
208.8
295_1
61 years, female
208.2
324_1
76 years, male
207.9
313_1
79 years, female
203.4
266_1
85 years, male
196.9
292_1
71 years, male
195.2
163_1
78 years, male
192.8
355_1
70 years, female
189.8
377_1
82 years, female
189.4
347_1
72 years, male
187.8
288_1
66 years, female
187.3
349_1
83 years, male
182.4
406_1
79 years, male
181.3
384_1
83 years, male
181.1
375_1
74 years, female
177.1
389_1
86 years, female
177.0
376_1
75 years, female
175.1
237_1
82 years, male
172.6
177_1
74 years, male
169.7
286_1
68 years, female
167.7
425_1
59 years, female
164.6
41_1
94 years, female
164.4
318_1
68 years, male
163.0
264_1
73 years, female
155.3
396_1
62 years, male
151.0
308_1
70 years, female
149.5
452_1
88 years, female
149.1
405_1
91 years, male
146.9
189_1
76 years, male
144.7
265_1
87 years, male
144.5
394_1
75 years, female
143.0
501_1
88 years, male
142.8
404_1
82 years, female
137.4
466_1
57 years, female
136.1
379_1
60 years, male
130.5
229_1
69 years, female
114.2
246_1
77 years, male
106.7
414_1
84 years, female
70.1
413_1
59 years, female
64.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.