HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:11.0 nTPM
HPA:11.0 nTPM
GTEx:3.6 nTPM
FANTOM5:12.5 Scaled Tags Per Million
Pig:15.4 nTPM
Mouse:8.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.0
Sample id Sample description nTPM
Hippocampus
nTPM: 8.9
1898 Male, age 80, left hemisphere 10.8
2148 Female, age 91, left hemisphere 9.6
2621 Female, age 67, right hemisphere 9.5
1855 Male, age 76, left hemisphere 8.1
1911 Female, age 85, right hemisphere 7.6
2529 Female, age 94, left hemisphere 7.6
Dentate gyrus
nTPM: 10.3
2531 Female, age 67, both hemispheres 12.7
1927 Female, age 91, both hemispheres 11.7
2530 Female, age 94, left hemisphere 11.2
2528 Male, age 74, both hemispheres 9.2
2246 Female, age 85, both hemispheres 8.9
2010 Male, age 76, both hemispheres 7.9
Entorhinal gyrus
nTPM: 8.9
1938 Female, age 85, left hemisphere 9.8
1787 Male, age 76, left hemisphere 9.7
2764 Male, age 80, right hemisphere 9.2
2686 Male, age 75, right hemisphere 9.1
2613 Female, age 94, left hemisphere 8.9
2117 Female, age 91, right hemisphere 6.5
Hippocampus, CA1
nTPM: 9.4
2045 Male, age 76, both hemispheres 11.3
2749 Male, age 80, left hemisphere 9.8
2527 Male, age 74, both hemispheres 8.8
1873 Female, age 85, both hemispheres 8.5
2082 Female, age 91, right hemisphere 8.4
Hippocampus, CA2
nTPM: 9.3
2437 Female, age 94, left hemisphere 12.1
1892 Male, age 76, both hemispheres 11.9
1963 Male, age 80, left hemisphere 8.8
2249 Male, age 74, both hemispheres 8.6
2113 Female, age 91, right hemisphere 7.7
1940 Female, age 85, left hemisphere 6.6
Hippocampus, CA3
nTPM: 11.0
2861 Female, age 67, both hemispheres 14.7
2620 Female, age 94, left hemisphere 12.2
1867 Male, age 76, both hemispheres 11.3
2137 Male, age 80, left hemisphere 10.9
1891 Female, age 85, both hemispheres 9.1
2436 Male, age 74, both hemispheres 7.9
Parahippocampal cortex
nTPM: 8.6
1990 Female, age 91, right hemisphere 10.3
1850 Male, age 80, both hemispheres 9.1
2622 Female, age 67, right hemisphere 9.0
2245 Female, age 91, both hemispheres 8.8
2692 Male, age 74, both hemispheres 8.7
1933 Female, age 85, both hemispheres 8.6
2250 Female, age 67, right hemisphere 8.4
2693 Female, age 94, both hemispheres 8.0
2532 Female, age 72, left hemisphere 7.9
2018 Male, age 76, both hemispheres 7.4
Perirhinal gyrus
nTPM: 9.4
1847 Female, age 91, left hemisphere 12.5
1841 Female, age 85, right hemisphere 9.1
2521 Female, age 94, right hemisphere 8.8
1794 Male, age 80, right hemisphere 8.7
2848 Male, age 76, right hemisphere 7.7
Subiculum
nTPM: 8.8
1977 Female, age 85, both hemispheres 10.4
2438 Female, age 94, left hemisphere 9.6
1901 Male, age 80, both hemispheres 9.5
2619 Male, age 74, both hemispheres 9.0
2729 Female, age 91, right hemisphere 7.5
2042 Male, age 76, both hemispheres 6.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.6
Samples: 197

Max nTPM: 20.2
Min nTPM: 0.7
Std nTPM: 2.1
Median nTPM: 3.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 20.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 13.1
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 11.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 8.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 8.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 7.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 7.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 7.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 7.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 6.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 6.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.5
FF:10153-102I9 76 years, female 13.5
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 12.5
Min nTPM: 8.7
Sample A Female 8.7
Sample B Female 11.4
Sample C Male 12.5
Sample D Male 9.7
Entorhinal cortex
nTPM: 14.6
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.1
Sample A Female 17.1
Sample B Female 13.4
Sample C Male 14.8
Sample D Male 13.1
Subiculum
nTPM: 15.4
Samples: 4

Max nTPM: 19.0
Min nTPM: 13.8
Sample A Female 19.0
Sample B Female 13.8
Sample C Male 15.0
Sample D Male 13.8
Ventral hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 12.0
Min nTPM: 7.4
Sample A Female 7.4
Sample B Female 10.7
Sample C Male 12.0
Sample D Male 9.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 10.0
Min nTPM: 7.4
Sample A Male 10.0
Sample B Male 9.3
Sample C Female 7.4
Sample D Female 8.8
Hippocampal formation
nTPM: 3.8
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.0
Sample A Male 3.5
Sample B Male 4.0
Sample C Female 3.0
Sample D Female 4.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69013314 Antisense, RP_050309_02_C04, Mouse strain C57BL/6J (56 days, male) 0.3
70301275 Antisense, RP_050309_02_C04, Mouse strain C57BL/6J (56 days, male) 0.2

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