HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:92.3 nTPM
HPA:92.3 nTPM
GTEx:80.0 nTPM
FANTOM5:94.6 Scaled Tags Per Million
Pig:16.9 nTPM
Mouse:38.5 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042745Antibody CAB034320
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.3
Sample id Sample description nTPM
Hippocampus
nTPM: 92.3
2621 Female, age 67, right hemisphere 97.9
1855 Male, age 76, left hemisphere 94.5
1898 Male, age 80, left hemisphere 93.8
1911 Female, age 85, right hemisphere 90.4
2529 Female, age 94, left hemisphere 89.6
2148 Female, age 91, left hemisphere 87.3
Dentate gyrus
nTPM: 89.8
2530 Female, age 94, left hemisphere 93.8
2010 Male, age 76, both hemispheres 92.1
2531 Female, age 67, both hemispheres 90.2
2246 Female, age 85, both hemispheres 88.2
2528 Male, age 74, both hemispheres 88.0
1927 Female, age 91, both hemispheres 86.4
Entorhinal gyrus
nTPM: 86.5
2117 Female, age 91, right hemisphere 90.8
1787 Male, age 76, left hemisphere 88.5
1938 Female, age 85, left hemisphere 85.6
2764 Male, age 80, right hemisphere 85.2
2686 Male, age 75, right hemisphere 84.8
2613 Female, age 94, left hemisphere 84.4
Hippocampus, CA1
nTPM: 86.4
2045 Male, age 76, both hemispheres 87.6
2082 Female, age 91, right hemisphere 87.1
2527 Male, age 74, both hemispheres 87.1
1873 Female, age 85, both hemispheres 86.2
2749 Male, age 80, left hemisphere 84.0
Hippocampus, CA2
nTPM: 90.1
1940 Female, age 85, left hemisphere 96.5
2437 Female, age 94, left hemisphere 91.9
1892 Male, age 76, both hemispheres 90.7
2113 Female, age 91, right hemisphere 87.7
2249 Male, age 74, both hemispheres 87.6
1963 Male, age 80, left hemisphere 86.5
Hippocampus, CA3
nTPM: 88.5
1867 Male, age 76, both hemispheres 93.2
2436 Male, age 74, both hemispheres 90.7
2861 Female, age 67, both hemispheres 90.0
1891 Female, age 85, both hemispheres 87.5
2137 Male, age 80, left hemisphere 85.7
2620 Female, age 94, left hemisphere 84.1
Parahippocampal cortex
nTPM: 87.8
2250 Female, age 67, right hemisphere 96.1
2018 Male, age 76, both hemispheres 93.7
2245 Female, age 91, both hemispheres 88.1
2532 Female, age 72, left hemisphere 87.7
1990 Female, age 91, right hemisphere 87.2
1850 Male, age 80, both hemispheres 86.1
2693 Female, age 94, both hemispheres 85.7
1933 Female, age 85, both hemispheres 85.1
2622 Female, age 67, right hemisphere 84.2
2692 Male, age 74, both hemispheres 84.1
Perirhinal gyrus
nTPM: 86.7
2521 Female, age 94, right hemisphere 89.9
2848 Male, age 76, right hemisphere 88.6
1794 Male, age 80, right hemisphere 85.5
1847 Female, age 91, left hemisphere 84.9
1841 Female, age 85, right hemisphere 84.7
Subiculum
nTPM: 89.7
2042 Male, age 76, both hemispheres 95.4
2729 Female, age 91, right hemisphere 91.2
2619 Male, age 74, both hemispheres 89.6
1901 Male, age 80, both hemispheres 88.8
2438 Female, age 94, left hemisphere 88.4
1977 Female, age 85, both hemispheres 84.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 80.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 80.0
Samples: 197

Max nTPM: 784.5
Min nTPM: 10.8
Std nTPM: 77.8
Median nTPM: 60.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 784.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 431.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 333.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 328.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 272.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 238.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 225.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 222.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 222.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 214.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 213.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.6
FF:10153-102I9 76 years, female 109.7
FF:10169-103B7 60 years, female 79.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 24.6
Min nTPM: 7.5
Sample A Female 21.2
Sample B Female 14.3
Sample C Male 24.6
Sample D Male 7.5
Entorhinal cortex
nTPM: 10.0
Samples: 4

Max nTPM: 12.2
Min nTPM: 6.1
Sample A Female 10.1
Sample B Female 11.7
Sample C Male 12.2
Sample D Male 6.1
Subiculum
nTPM: 14.3
Samples: 4

Max nTPM: 16.5
Min nTPM: 12.5
Sample A Female 16.5
Sample B Female 13.1
Sample C Male 12.5
Sample D Male 15.1
Ventral hippocampus
nTPM: 13.5
Samples: 4

Max nTPM: 20.9
Min nTPM: 10.0
Sample A Female 12.4
Sample B Female 10.0
Sample C Male 20.9
Sample D Male 10.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.5
Samples: 4

Max nTPM: 47.8
Min nTPM: 25.9
Sample A Male 34.2
Sample B Male 25.9
Sample C Female 46.1
Sample D Female 47.8
Hippocampal formation
nTPM: 33.8
Samples: 4

Max nTPM: 36.6
Min nTPM: 31.7
Sample A Male 34.9
Sample B Male 32.0
Sample C Female 31.7
Sample D Female 36.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
104600 Antisense, RP_040428_01_F10, Mouse strain C57BL/6J (56 days, male) 1.2

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