HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:30.1 nTPM
HPA:30.1 nTPM
GTEx:27.8 nTPM
FANTOM5:26.0 Scaled Tags Per Million
Pig:20.4 nTPM
Mouse:42.5 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.1
Sample id Sample description nTPM
Hippocampus
nTPM: 24.5
1898 Male, age 80, left hemisphere 29.8
2621 Female, age 67, right hemisphere 24.8
1855 Male, age 76, left hemisphere 24.7
2148 Female, age 91, left hemisphere 23.3
2529 Female, age 94, left hemisphere 22.6
1911 Female, age 85, right hemisphere 21.5
Dentate gyrus
nTPM: 25.8
1927 Female, age 91, both hemispheres 29.0
2010 Male, age 76, both hemispheres 26.9
2530 Female, age 94, left hemisphere 26.3
2528 Male, age 74, both hemispheres 25.1
2246 Female, age 85, both hemispheres 23.7
2531 Female, age 67, both hemispheres 23.5
Entorhinal gyrus
nTPM: 25.2
2764 Male, age 80, right hemisphere 27.1
1938 Female, age 85, left hemisphere 27.0
2613 Female, age 94, left hemisphere 26.3
1787 Male, age 76, left hemisphere 25.7
2117 Female, age 91, right hemisphere 22.7
2686 Male, age 75, right hemisphere 22.6
Hippocampus, CA1
nTPM: 26.7
2749 Male, age 80, left hemisphere 35.8
1873 Female, age 85, both hemispheres 27.4
2045 Male, age 76, both hemispheres 25.9
2527 Male, age 74, both hemispheres 23.5
2082 Female, age 91, right hemisphere 21.1
Hippocampus, CA2
nTPM: 25.9
1963 Male, age 80, left hemisphere 31.6
1892 Male, age 76, both hemispheres 30.0
2437 Female, age 94, left hemisphere 24.4
2249 Male, age 74, both hemispheres 24.3
1940 Female, age 85, left hemisphere 23.0
2113 Female, age 91, right hemisphere 21.9
Hippocampus, CA3
nTPM: 25.3
2137 Male, age 80, left hemisphere 30.8
1867 Male, age 76, both hemispheres 26.8
1891 Female, age 85, both hemispheres 24.0
2436 Male, age 74, both hemispheres 24.0
2620 Female, age 94, left hemisphere 23.0
2861 Female, age 67, both hemispheres 23.0
Parahippocampal cortex
nTPM: 25.4
1850 Male, age 80, both hemispheres 30.6
1990 Female, age 91, right hemisphere 27.5
1933 Female, age 85, both hemispheres 26.2
2693 Female, age 94, both hemispheres 26.1
2250 Female, age 67, right hemisphere 25.9
2532 Female, age 72, left hemisphere 25.3
2245 Female, age 91, both hemispheres 24.5
2018 Male, age 76, both hemispheres 23.2
2692 Male, age 74, both hemispheres 23.2
2622 Female, age 67, right hemisphere 21.8
Perirhinal gyrus
nTPM: 30.1
1794 Male, age 80, right hemisphere 31.7
1847 Female, age 91, left hemisphere 31.7
1841 Female, age 85, right hemisphere 30.2
2521 Female, age 94, right hemisphere 30.0
2848 Male, age 76, right hemisphere 27.1
Subiculum
nTPM: 23.2
1977 Female, age 85, both hemispheres 27.0
1901 Male, age 80, both hemispheres 25.6
2619 Male, age 74, both hemispheres 22.7
2729 Female, age 91, right hemisphere 21.9
2042 Male, age 76, both hemispheres 21.0
2438 Female, age 94, left hemisphere 20.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.8
Samples: 197

Max nTPM: 73.7
Min nTPM: 13.2
Std nTPM: 8.7
Median nTPM: 26.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 73.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 58.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 55.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 54.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 46.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 46.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 46.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 44.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 43.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 43.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 43.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.0
FF:10169-103B7 60 years, female 31.3
FF:10153-102I9 76 years, female 20.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 24.3
Min nTPM: 17.7
Sample A Female 24.3
Sample B Female 20.3
Sample C Male 17.7
Sample D Male 19.4
Entorhinal cortex
nTPM: 20.2
Samples: 4

Max nTPM: 22.3
Min nTPM: 17.4
Sample A Female 21.6
Sample B Female 22.3
Sample C Male 19.5
Sample D Male 17.4
Subiculum
nTPM: 18.8
Samples: 4

Max nTPM: 24.0
Min nTPM: 16.6
Sample A Female 24.0
Sample B Female 17.6
Sample C Male 16.6
Sample D Male 17.1
Ventral hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 21.2
Min nTPM: 16.5
Sample A Female 21.2
Sample B Female 16.5
Sample C Male 18.0
Sample D Male 19.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.5
Samples: 4

Max nTPM: 51.0
Min nTPM: 36.5
Sample A Male 40.2
Sample B Male 36.5
Sample C Female 42.1
Sample D Female 51.0
Hippocampal formation
nTPM: 41.7
Samples: 4

Max nTPM: 46.1
Min nTPM: 37.5
Sample A Male 46.1
Sample B Male 41.4
Sample C Female 41.7
Sample D Female 37.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
67978659 Antisense, RP_040923_01_D11, Mouse strain C57BL/6J (56 days, male) 1.9

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