COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:3.1 nTPM
HPA:3.1 nTPM
GTEx:2.8 nTPM
FANTOM5:11.9 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA043058
Endothelial cells Not detected
Glandular cells Not detected
Peripheral nerve/ganglion Not detected


COLON - HPA RNA-seqi
Average nTPM 3.1
overview
Male, age 54 		Colon sample 67
nTPM: 3.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 2.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 0.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 2.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 3.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 3.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 3.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 2.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 3.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 3.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 2.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 2.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 4.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 2.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 2.8
Samples: 373

Max nTPM: 6.6
Min nTPM: 0.7
Std nTPM: 1.0
Median nTPM: 2.7
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 6.6
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 6.5
GTEX-1H1ZS-2626-SM-9QEIX 70-79 years, male 6.0
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 5.8
GTEX-1HKZK-2026-SM-9WYUF 40-49 years, male 5.6
GTEX-WY7C-1926-SM-4ONCI 50-59 years, male 5.4
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 5.0
GTEX-1J8QM-1226-SM-CY8HI 60-69 years, female 5.0
GTEX-1F5PK-1726-SM-7RHHW 50-59 years, male 4.9
GTEX-1C475-1526-SM-7DHM3 40-49 years, female 4.8
GTEX-1AYCT-1926-SM-793AE 50-59 years, male 4.7
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Colon - Transverse
Average nTPM: 2.3
Samples: 406

Max nTPM: 6.0
Min nTPM: 0.5
Std nTPM: 0.9
Median nTPM: 2.1
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 6.0
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 5.7
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 5.5
GTEX-QLQ7-1126-SM-CYPRB 60-69 years, male 5.3
GTEX-ZF29-1726-SM-4WKFV 60-69 years, female 5.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 5.1
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 5.0
GTEX-14E1K-1826-SM-793DT 50-59 years, male 4.9
GTEX-1PWST-2426-SM-EWRMP 70-79 years, male 4.7
GTEX-14PJ3-0926-SM-69LQG 50-59 years, male 4.5
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 4.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 11.9
FF:10014-101C5 62,83,84 years, mixed 11.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.