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SERPINI1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:86.2 nTPM
FANTOM5:108.1 Scaled Tags Per Million
Pig:19.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA001565Antibody HPA056092
Glial cells Not detectedNot detected
Neuronal cells LowLow




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 86.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 86.2
Samples: 246

Max nTPM: 399.9
Min nTPM: 25.4
Std nTPM: 38.8
Median nTPM: 81.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 399.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 299.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 219.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 215.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 202.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 191.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 181.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 180.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 168.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 148.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 145.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 138.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 137.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 136.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 129.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 129.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 128.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 128.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 126.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 125.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 123.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 123.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 122.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 121.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 121.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 120.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 119.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 118.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 118.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 117.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 117.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 116.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 116.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 113.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 112.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 111.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 110.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 110.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 110.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 109.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 108.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 107.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 106.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 106.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 105.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 105.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 105.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 104.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 104.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 104.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 103.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 102.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 102.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 100.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 100.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 100.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 99.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 98.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 98.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 98.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 98.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 97.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 97.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 97.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 97.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 97.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 97.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 97.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 97.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 96.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 95.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 95.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 94.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 94.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 93.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 93.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 93.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 93.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 93.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 93.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 93.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 92.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 92.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 92.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 92.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 91.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 91.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 91.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 90.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 90.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 89.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 88.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 88.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 87.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 87.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 87.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 87.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 86.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 86.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 86.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 86.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 86.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 86.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 85.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 85.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 84.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 84.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 84.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 84.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 84.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 83.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 83.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 83.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 83.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 83.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 83.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 83.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 83.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 82.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 82.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 81.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 81.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 81.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 80.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 80.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 80.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 79.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 79.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 79.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 78.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 78.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 78.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 78.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 77.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 77.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 77.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 77.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 77.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 76.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 76.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 76.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 75.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 75.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 75.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 75.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 75.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 74.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 74.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 74.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 74.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 73.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 73.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 73.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 72.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 71.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 71.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 71.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 71.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 71.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 70.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 70.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 70.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 69.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 69.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 69.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 68.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 68.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 68.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 68.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 68.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 67.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 67.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 67.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 67.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 67.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 66.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 66.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 66.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 66.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 66.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 65.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 65.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 65.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 65.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 65.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 64.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 64.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 64.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 63.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 62.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 62.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 62.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 62.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 62.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 61.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 61.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 60.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 59.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 59.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 59.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 58.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 58.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 57.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 56.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 56.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 56.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 55.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 55.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 55.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 55.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 54.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 54.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 53.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 53.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 53.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 53.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 52.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 52.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 52.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 52.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 52.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 52.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 50.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 50.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 50.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 49.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 49.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 48.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 47.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 47.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 47.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 45.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 45.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 45.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 44.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 41.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 39.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 39.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 39.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 38.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 37.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 35.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 33.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 33.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 27.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 25.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 108.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 108.1
FF:10164-103B2 76 years, female 108.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 19.1
Pig sample Sample description nTPM
Caudate
nTPM: 19.1
Samples: 4

Max nTPM: 21.1
Min nTPM: 16.6
Sample A Female 21.1
Sample B Female 18.5
Sample C Male 16.6
Sample D Male 20.1

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