HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:71.1 nTPM
HPA:71.1 nTPM
GTEx:55.7 nTPM
FANTOM5:82.7 Scaled Tags Per Million
Pig:43.8 nTPM
Mouse:138.7 nTPM
Allen mouse:11.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036683Antibody HPA036684
Glial cells LowNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.1
Sample id Sample description nTPM
Hippocampus
nTPM: 68.1
1898 Male, age 80, left hemisphere 73.1
2529 Female, age 94, left hemisphere 68.5
1855 Male, age 76, left hemisphere 68.2
2621 Female, age 67, right hemisphere 68.1
1911 Female, age 85, right hemisphere 65.6
2148 Female, age 91, left hemisphere 65.1
Dentate gyrus
nTPM: 67.1
2010 Male, age 76, both hemispheres 70.5
1927 Female, age 91, both hemispheres 67.8
2246 Female, age 85, both hemispheres 67.3
2528 Male, age 74, both hemispheres 67.3
2530 Female, age 94, left hemisphere 65.6
2531 Female, age 67, both hemispheres 63.9
Entorhinal gyrus
nTPM: 67.8
2764 Male, age 80, right hemisphere 70.9
1787 Male, age 76, left hemisphere 69.5
1938 Female, age 85, left hemisphere 68.7
2117 Female, age 91, right hemisphere 67.9
2613 Female, age 94, left hemisphere 65.6
2686 Male, age 75, right hemisphere 64.0
Hippocampus, CA1
nTPM: 70.6
2749 Male, age 80, left hemisphere 80.2
1873 Female, age 85, both hemispheres 69.3
2527 Male, age 74, both hemispheres 69.2
2045 Male, age 76, both hemispheres 68.9
2082 Female, age 91, right hemisphere 65.2
Hippocampus, CA2
nTPM: 69.6
2249 Male, age 74, both hemispheres 73.7
1892 Male, age 76, both hemispheres 73.0
1963 Male, age 80, left hemisphere 72.0
1940 Female, age 85, left hemisphere 67.2
2437 Female, age 94, left hemisphere 66.7
2113 Female, age 91, right hemisphere 65.3
Hippocampus, CA3
nTPM: 70.1
2436 Male, age 74, both hemispheres 78.3
1867 Male, age 76, both hemispheres 72.0
2137 Male, age 80, left hemisphere 71.7
1891 Female, age 85, both hemispheres 69.7
2620 Female, age 94, left hemisphere 65.4
2861 Female, age 67, both hemispheres 63.4
Parahippocampal cortex
nTPM: 67.5
1850 Male, age 80, both hemispheres 72.3
1990 Female, age 91, right hemisphere 69.7
2250 Female, age 67, right hemisphere 69.4
2018 Male, age 76, both hemispheres 68.1
1933 Female, age 85, both hemispheres 67.5
2532 Female, age 72, left hemisphere 67.2
2245 Female, age 91, both hemispheres 66.3
2692 Male, age 74, both hemispheres 65.9
2693 Female, age 94, both hemispheres 65.1
2622 Female, age 67, right hemisphere 63.9
Perirhinal gyrus
nTPM: 71.1
1847 Female, age 91, left hemisphere 75.5
1794 Male, age 80, right hemisphere 74.1
1841 Female, age 85, right hemisphere 69.7
2848 Male, age 76, right hemisphere 68.4
2521 Female, age 94, right hemisphere 67.9
Subiculum
nTPM: 68.4
1901 Male, age 80, both hemispheres 71.2
1977 Female, age 85, both hemispheres 70.5
2438 Female, age 94, left hemisphere 68.1
2042 Male, age 76, both hemispheres 67.0
2729 Female, age 91, right hemisphere 66.9
2619 Male, age 74, both hemispheres 66.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.7
Samples: 197

Max nTPM: 113.0
Min nTPM: 35.6
Std nTPM: 10.0
Median nTPM: 54.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 113.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 85.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 84.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 83.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 75.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 74.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 73.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 72.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 70.7
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 70.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 70.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.7
FF:10169-103B7 60 years, female 87.8
FF:10153-102I9 76 years, female 77.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.8
Samples: 4

Max nTPM: 55.6
Min nTPM: 35.5
Sample A Female 55.6
Sample B Female 43.3
Sample C Male 40.7
Sample D Male 35.5
Entorhinal cortex
nTPM: 39.1
Samples: 4

Max nTPM: 48.1
Min nTPM: 31.9
Sample A Female 40.4
Sample B Female 48.1
Sample C Male 35.9
Sample D Male 31.9
Subiculum
nTPM: 38.0
Samples: 4

Max nTPM: 49.0
Min nTPM: 32.4
Sample A Female 49.0
Sample B Female 37.5
Sample C Male 32.4
Sample D Male 33.0
Ventral hippocampus
nTPM: 40.9
Samples: 4

Max nTPM: 47.2
Min nTPM: 33.4
Sample A Female 45.2
Sample B Female 33.4
Sample C Male 47.2
Sample D Male 37.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 138.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 113.8
Samples: 4

Max nTPM: 125.6
Min nTPM: 102.8
Sample A Male 109.1
Sample B Male 117.5
Sample C Female 125.6
Sample D Female 102.8
Hippocampal formation
nTPM: 138.7
Samples: 4

Max nTPM: 144.0
Min nTPM: 132.5
Sample A Male 144.0
Sample B Male 132.5
Sample C Female 140.2
Sample D Female 138.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.3
564780 Antisense, RP_040826_01_F07, Mouse strain C57BL/6J (56 days, male) 11.3

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