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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:142.3 nTPM
FANTOM5:436.6 Scaled Tags Per Million
Pig:162.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA051368Antibody HPA061671
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 142.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 142.3
Samples: 246

Max nTPM: 555.2
Min nTPM: 4.7
Std nTPM: 92.0
Median nTPM: 133.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 555.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 496.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 456.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 364.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 349.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 348.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 326.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 322.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 311.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 307.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 303.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 294.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 292.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 289.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 288.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 283.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 281.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 279.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 272.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 271.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 269.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 267.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 262.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 262.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 256.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 253.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 252.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 250.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 250.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 249.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 249.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 245.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 244.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 239.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 237.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 236.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 236.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 235.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 234.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 233.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 231.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 231.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 230.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 230.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 229.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 224.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 221.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 219.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 216.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 214.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 210.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 208.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 208.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 208.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 205.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 202.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 200.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 200.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 197.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 197.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 196.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 196.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 193.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 193.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 192.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 192.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 191.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 191.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 190.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 189.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 187.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 181.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 179.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 179.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 178.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 178.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 178.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 178.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 176.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 175.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 175.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 174.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 174.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 173.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 173.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 172.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 172.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 171.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 171.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 170.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 170.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 168.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 166.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 165.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 161.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 161.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 159.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 159.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 157.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 156.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 156.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 155.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 153.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 152.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 151.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 151.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 150.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 150.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 149.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 147.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 147.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 143.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 142.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 142.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 141.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 141.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 140.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 139.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 138.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 138.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 137.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 137.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 133.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 133.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 132.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 132.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 132.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 131.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 131.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 131.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 129.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 128.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 128.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 128.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 127.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 126.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 126.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 125.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 122.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 122.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 121.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 121.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 120.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 119.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 118.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 116.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 116.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 116.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 115.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 114.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 114.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 113.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 112.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 109.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 105.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 105.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 105.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 103.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 102.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 101.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 98.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 95.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 95.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 94.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 91.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 90.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 90.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 88.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 86.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 84.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 84.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 83.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 82.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 79.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 78.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 78.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 75.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 73.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 73.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 72.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 71.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 70.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 69.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 69.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 67.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 66.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 66.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 65.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 65.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 64.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 63.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 61.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 61.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 58.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 56.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 55.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 54.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 53.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 53.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 51.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 50.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 48.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 47.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 47.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 47.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 46.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 46.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 44.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 41.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 41.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 40.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 39.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 36.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 33.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 33.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 32.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 31.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 31.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 30.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 29.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 28.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 27.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 27.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 26.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 26.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 25.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 21.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 21.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 21.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 20.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 18.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 18.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 18.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 17.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 16.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 16.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 15.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 13.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 12.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 10.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 10.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 9.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 7.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 6.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 4.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 4.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 436.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 436.6
FF:10164-103B2 76 years, female 436.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 162.3
Pig sample Sample description nTPM
Caudate
nTPM: 162.3
Samples: 4

Max nTPM: 189.3
Min nTPM: 131.2
Sample A Female 131.2
Sample B Female 152.4
Sample C Male 189.3
Sample D Male 176.2

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