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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:66.0 nTPM
FANTOM5:36.8 Scaled Tags Per Million
Pig:33.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA044143
Glial cells Medium
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 66.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 66.0
Samples: 246

Max nTPM: 177.4
Min nTPM: 36.3
Std nTPM: 20.7
Median nTPM: 61.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 177.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 146.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 144.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 133.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 129.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 125.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 121.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 118.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 115.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 111.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 110.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 107.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 106.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 106.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 105.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 104.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 104.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 102.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 102.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 97.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 94.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 93.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 92.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 92.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 89.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 89.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 88.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 87.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 86.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 86.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 86.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 86.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 86.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 85.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 85.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 85.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 85.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 82.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 82.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 80.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 80.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 80.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 79.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 79.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 79.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 78.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 77.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 77.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 75.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 74.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 74.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 74.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 74.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 74.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 74.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 74.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 73.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 73.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 73.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 73.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 73.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 72.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 72.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 72.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 71.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 71.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 71.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 71.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 71.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 70.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 70.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 70.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 70.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 70.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 70.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 69.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 69.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 69.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 69.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 69.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 68.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 68.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 68.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 68.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 68.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 68.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 68.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 68.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 68.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 67.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 67.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 66.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 66.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 66.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 66.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 66.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 66.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 66.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 65.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 65.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 65.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 65.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 64.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 64.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 64.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 64.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 64.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 64.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 64.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 63.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 63.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 63.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 63.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 63.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 63.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 63.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 62.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 62.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 62.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 62.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 61.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 61.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 61.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 61.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 61.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 61.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 61.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 61.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 61.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 60.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 60.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 60.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 60.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 60.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 60.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 60.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 60.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 60.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 60.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 60.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 59.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 59.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 59.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 59.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 59.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 59.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 58.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 58.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 58.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 58.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 58.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 58.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 57.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 57.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 57.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 56.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 56.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 56.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 56.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 56.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 56.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 56.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 56.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 56.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 55.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 55.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 55.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 55.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 55.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 55.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 54.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 54.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 54.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 54.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 54.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 54.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 53.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 53.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 53.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 52.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 52.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 52.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 52.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 52.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 52.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 51.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 51.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 51.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 51.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 51.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 51.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 51.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 50.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 50.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 50.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 50.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 50.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 50.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 50.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 49.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 49.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 49.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 49.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 49.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 48.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 48.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 48.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 48.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 47.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 47.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 47.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 47.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 47.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 46.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 46.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 46.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 45.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 45.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 45.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 45.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 45.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 45.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 44.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 44.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 44.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 43.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 43.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 43.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 43.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 42.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 42.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 42.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 42.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 41.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 41.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 40.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 40.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 40.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 40.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 39.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 39.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 38.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 38.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 37.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 36.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 36.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 36.8
FF:10164-103B2 76 years, female 36.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 33.8
Pig sample Sample description nTPM
Caudate
nTPM: 33.8
Samples: 4

Max nTPM: 36.3
Min nTPM: 30.0
Sample A Female 34.7
Sample B Female 30.0
Sample C Male 36.3
Sample D Male 34.2

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