COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:18.4 nTPM
HPA:4.6 nTPM
GTEx:18.4 nTPM
FANTOM5:40.7 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 4.6
overview
Male, age 54 		Colon sample 67
nTPM: 3.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 3.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 1.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 3.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 4.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 10.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 3.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 8.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 2.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 4.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 6.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 18.4
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 18.4
Samples: 373

Max nTPM: 36.3
Min nTPM: 2.5
Std nTPM: 5.9
Median nTPM: 18.9
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 36.3
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 31.7
GTEX-15DYW-2426-SM-7KUG8 60-69 years, female 31.2
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 31.1
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 31.0
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 30.9
GTEX-15RIF-1426-SM-7KUKQ 20-29 years, male 30.2
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 30.2
GTEX-14E1K-1626-SM-664MO 50-59 years, male 30.1
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 29.8
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 29.7
Show allShow less
Colon - Transverse
Average nTPM: 9.5
Samples: 406

Max nTPM: 33.0
Min nTPM: 0.5
Std nTPM: 6.9
Median nTPM: 8.1
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 33.0
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 30.4
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 26.9
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 26.8
GTEX-1RAZQ-2126-SM-DTX9V 30-39 years, male 26.2
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 25.8
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 25.2
GTEX-17JCI-2626-SM-7EWE6 60-69 years, female 24.7
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 24.6
GTEX-14E1K-1826-SM-793DT 50-59 years, male 24.3
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 23.9
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 40.7
FF:10014-101C5 62,83,84 years, mixed 40.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.