HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:16.4 nTPM
HPA:16.4 nTPM
GTEx:13.8 nTPM
FANTOM5:63.8 Scaled Tags Per Million
Pig:11.3 nTPM
Mouse:11.2 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.4
Sample id Sample description nTPM
Hippocampus
nTPM: 16.0
2529 Female, age 94, left hemisphere 18.6
1855 Male, age 76, left hemisphere 16.9
1911 Female, age 85, right hemisphere 16.0
1898 Male, age 80, left hemisphere 15.7
2621 Female, age 67, right hemisphere 14.9
2148 Female, age 91, left hemisphere 13.7
Dentate gyrus
nTPM: 15.1
2010 Male, age 76, both hemispheres 19.5
2246 Female, age 85, both hemispheres 16.5
2528 Male, age 74, both hemispheres 14.3
2530 Female, age 94, left hemisphere 13.8
1927 Female, age 91, both hemispheres 13.6
2531 Female, age 67, both hemispheres 12.9
Entorhinal gyrus
nTPM: 14.7
2117 Female, age 91, right hemisphere 18.3
2686 Male, age 75, right hemisphere 15.6
1938 Female, age 85, left hemisphere 14.9
1787 Male, age 76, left hemisphere 14.1
2764 Male, age 80, right hemisphere 13.7
2613 Female, age 94, left hemisphere 11.5
Hippocampus, CA1
nTPM: 16.4
2045 Male, age 76, both hemispheres 19.0
2749 Male, age 80, left hemisphere 17.6
2527 Male, age 74, both hemispheres 16.0
2082 Female, age 91, right hemisphere 14.7
1873 Female, age 85, both hemispheres 14.6
Hippocampus, CA2
nTPM: 14.9
2249 Male, age 74, both hemispheres 16.3
1963 Male, age 80, left hemisphere 16.1
1940 Female, age 85, left hemisphere 15.2
2113 Female, age 91, right hemisphere 14.7
2437 Female, age 94, left hemisphere 13.9
1892 Male, age 76, both hemispheres 13.3
Hippocampus, CA3
nTPM: 15.2
1867 Male, age 76, both hemispheres 18.6
1891 Female, age 85, both hemispheres 16.2
2137 Male, age 80, left hemisphere 15.9
2436 Male, age 74, both hemispheres 15.1
2620 Female, age 94, left hemisphere 13.1
2861 Female, age 67, both hemispheres 12.3
Parahippocampal cortex
nTPM: 14.8
2018 Male, age 76, both hemispheres 17.9
1850 Male, age 80, both hemispheres 15.5
1933 Female, age 85, both hemispheres 15.2
2250 Female, age 67, right hemisphere 15.1
2622 Female, age 67, right hemisphere 14.4
2692 Male, age 74, both hemispheres 14.4
2693 Female, age 94, both hemispheres 14.4
2245 Female, age 91, both hemispheres 14.3
2532 Female, age 72, left hemisphere 13.6
1990 Female, age 91, right hemisphere 13.5
Perirhinal gyrus
nTPM: 13.6
2521 Female, age 94, right hemisphere 15.5
1794 Male, age 80, right hemisphere 14.2
1841 Female, age 85, right hemisphere 14.0
1847 Female, age 91, left hemisphere 12.6
2848 Male, age 76, right hemisphere 11.9
Subiculum
nTPM: 16.2
2042 Male, age 76, both hemispheres 18.5
1901 Male, age 80, both hemispheres 16.4
2438 Female, age 94, left hemisphere 16.4
2619 Male, age 74, both hemispheres 15.9
1977 Female, age 85, both hemispheres 15.7
2729 Female, age 91, right hemisphere 14.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.8
Samples: 197

Max nTPM: 75.2
Min nTPM: 4.3
Std nTPM: 8.2
Median nTPM: 11.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 75.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 50.0
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 41.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 40.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 32.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 31.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 30.6
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 30.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 30.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 29.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 28.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.8
FF:10169-103B7 60 years, female 86.8
FF:10153-102I9 76 years, female 40.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 13.0
Min nTPM: 7.9
Sample A Female 12.4
Sample B Female 9.9
Sample C Male 13.0
Sample D Male 7.9
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.5
Sample A Female 11.1
Sample B Female 11.5
Sample C Male 11.9
Sample D Male 9.5
Subiculum
nTPM: 11.3
Samples: 4

Max nTPM: 12.6
Min nTPM: 10.6
Sample A Female 12.6
Sample B Female 10.6
Sample C Male 11.5
Sample D Male 10.6
Ventral hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 12.7
Min nTPM: 9.8
Sample A Female 9.9
Sample B Female 9.8
Sample C Male 12.7
Sample D Male 10.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.9
Samples: 4

Max nTPM: 15.1
Min nTPM: 9.0
Sample A Male 9.9
Sample B Male 15.1
Sample C Female 9.5
Sample D Female 9.0
Hippocampal formation
nTPM: 11.2
Samples: 4

Max nTPM: 12.0
Min nTPM: 10.6
Sample A Male 11.3
Sample B Male 10.9
Sample C Female 10.6
Sample D Female 12.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69981007 Antisense, RP_050512_04_E01, Mouse strain C57BL/6J (56 days, male) 0.3

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