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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1773.4 nTPM
GTEx:1773.4 nTPM
FANTOM5:29.7 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003372
Squamous epithelial cells Low



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1773.4
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 1773.4
Samples: 156

Max nTPM: 6032.7
Min nTPM: 892.9
Std nTPM: 614.6
Median nTPM: 1685.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 6032.7
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 4554.0
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 3296.5
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 3194.7
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 3092.3
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 2862.7
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 2744.1
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 2657.8
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 2647.9
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 2545.2
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 2522.5
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 2503.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 2498.8
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 2444.3
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 2439.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 2412.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 2379.2
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 2360.5
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 2304.3
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 2299.8
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 2273.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 2260.3
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 2256.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 2197.5
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 2170.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 2162.9
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 2130.6
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 2124.6
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 2103.0
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 2077.4
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 2075.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 2068.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 2062.5
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 2061.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 2055.3
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 2054.8
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 2037.4
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2028.1
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 2027.3
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1990.8
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1984.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1967.5
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1953.6
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 1933.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 1926.7
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1904.0
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 1903.9
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1892.2
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1890.5
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1882.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1876.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1863.9
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1863.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1862.0
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 1860.4
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 1838.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 1830.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 1829.2
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 1823.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1795.5
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1791.4
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1781.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1780.6
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1780.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1746.8
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 1738.8
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1732.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1723.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 1722.5
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 1719.0
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1715.5
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 1714.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1709.8
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1709.2
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 1702.4
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1697.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 1688.6
GTEX-1C475-0526-SM-793AC 40-49 years, female 1687.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1683.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1661.9
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 1648.3
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 1644.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1643.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1641.5
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 1638.9
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 1636.9
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 1635.9
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1634.3
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 1626.8
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1625.7
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 1623.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1618.9
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 1601.5
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1589.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 1584.8
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1578.6
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 1573.3
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 1559.1
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 1551.0
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 1549.5
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 1545.3
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1543.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1542.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1539.6
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1534.9
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1519.4
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 1518.8
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 1511.6
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1508.4
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1485.9
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1479.2
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 1472.5
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1468.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1467.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1465.5
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1463.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1443.2
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1427.4
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 1425.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 1422.9
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 1412.2
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 1402.2
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 1380.2
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1377.8
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1364.6
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1363.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 1361.6
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1360.4
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1351.6
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1351.1
GTEX-S341-1226-SM-4AD5S 40-49 years, female 1346.0
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1309.5
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 1298.5
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 1264.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 1235.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 1208.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1200.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1169.9
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1169.7
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1109.6
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 1096.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1095.3
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 1075.5
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 1069.8
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1068.5
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 1050.0
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 1042.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 1041.3
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1040.0
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1038.8
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 1036.6
GTEX-QCQG-1226-SM-48U23 50-59 years, female 992.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 988.7
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 979.6
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 936.7
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 892.9
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 29.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 29.7
FF:10204-103F6 68 years, female 29.7

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