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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA013440
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody CAB022486
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody CAB034887
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody CAB034888
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 7985.7
Min nTPM: 1330.0
Std nTPM: 1350.4
Median nTPM:
352_1
62 years, male
7985.7
172_1
72 years, female
7445.2
319_1
81 years, male
6831.7
6_1
73 years, female
6774.3
354_1
81 years, female
6611.9
386_1
76 years, male
6546.3
425_1
59 years, female
5890.9
355_1
70 years, female
5818.3
243_1
75 years, male
5743.7
356_1
87 years, female
5715.8
335_1
73 years, female
5613.0
350_1
84 years, female
5549.1
321_1
62 years, female
5520.0
163_1
78 years, male
5401.3
375_1
74 years, female
5332.3
286_1
68 years, female
5318.0
376_1
75 years, female
5272.2
349_1
83 years, male
5271.4
189_1
76 years, male
5262.5
229_1
69 years, female
5200.2
237_1
82 years, male
5197.4
447_1
81 years, male
5178.5
389_1
86 years, female
5132.1
353_1
82 years, female
5129.4
316_1
62 years, male
5093.0
292_1
71 years, male
5027.3
177_1
74 years, male
5018.0
347_1
72 years, male
4993.0
246_1
77 years, male
4942.9
379_1
60 years, male
4930.3
126_1
63 years, male
4861.3
324_1
76 years, male
4829.8
318_1
68 years, male
4815.0
377_1
82 years, female
4799.9
9_1
66 years, female
4759.0
115_1
83 years, male
4714.2
218_1
71 years, female
4708.9
404_1
82 years, female
4707.2
35_1
74 years, female
4597.1
153_1
70 years, female
4566.6
394_1
75 years, female
4560.0
480_1
63 years, male
4558.4
526_1
61 years, male
4530.4
320_1
89 years, female
4529.5
251_1
78 years, male
4503.1
406_1
79 years, male
4373.2
503_1
68 years, male
4329.5
468_1
89 years, male
4229.3
396_1
62 years, male
4219.8
405_1
91 years, male
4103.9
517_1
88 years, male
4044.5
137_1
83 years, male
4009.1
291_1
76 years, male
3984.3
99_1
64 years, male
3964.7
142_1
61 years, female
3914.9
266_1
85 years, male
3896.0
265_1
87 years, male
3895.0
415_1
77 years, female
3755.3
264_1
73 years, female
3743.6
117_1
61 years, male
3724.5
348_1
84 years, male
3700.1
518_1
75 years, female
3624.0
254_1
77 years, female
3618.9
81_1
67 years, male
3609.9
322_1
76 years, male
3587.9
145_1
84 years, male
3556.6
293_1
68 years, female
3511.1
351_1
91 years, male
3484.2
499_1
55 years, female
3479.1
217_1
76 years, male
3477.9
384_1
83 years, male
3438.1
32_1
67 years, male
3385.8
414_1
84 years, female
3335.7
317_1
60 years, male
3317.4
43_1
64 years, female
3279.0
18_1
88 years, male
3261.1
2_1
77 years, female
3226.1
162_1
79 years, female
3175.5
315_1
62 years, female
3094.1
17_1
71 years, male
3061.9
120_1
70 years, female
3061.7
173_1
67 years, male
3060.0
313_1
79 years, female
3008.8
506_1
65 years, male
3004.3
466_1
57 years, female
2960.5
4_1
88 years, female
2812.7
42_1
85 years, male
2811.1
311_1
78 years, male
2785.3
109_1
81 years, female
2573.5
288_1
66 years, female
2543.4
139_1
64 years, female
2489.1
452_1
88 years, female
2466.9
295_1
61 years, female
2411.6
490_1
67 years, female
2394.5
149_1
88 years, male
2253.6
119_1
70 years, female
2185.4
307_1
66 years, female
2168.3
413_1
59 years, female
2005.6
314_1
67 years, male
1824.9
89_1
63 years, male
1817.7
495_1
57 years, female
1792.3
491_1
89 years, female
1661.4
501_1
88 years, male
1479.5
41_1
94 years, female
1420.2
308_1
70 years, female
1330.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.