HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.6 nTPM
HPA:10.6 nTPM
GTEx:6.7 nTPM
FANTOM5:14.1 Scaled Tags Per Million
Pig:2.9 nTPM
Mouse:7.5 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062527
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.6
Sample id Sample description nTPM
Hippocampus
nTPM: 10.6
2529 Female, age 94, left hemisphere 11.1
1911 Female, age 85, right hemisphere 10.9
1855 Male, age 76, left hemisphere 10.8
2148 Female, age 91, left hemisphere 10.7
2621 Female, age 67, right hemisphere 10.3
1898 Male, age 80, left hemisphere 10.0
Dentate gyrus
nTPM: 10.4
2246 Female, age 85, both hemispheres 10.9
2530 Female, age 94, left hemisphere 10.7
2528 Male, age 74, both hemispheres 10.6
2531 Female, age 67, both hemispheres 10.2
1927 Female, age 91, both hemispheres 10.1
2010 Male, age 76, both hemispheres 10.1
Entorhinal gyrus
nTPM: 10.4
2117 Female, age 91, right hemisphere 11.0
2613 Female, age 94, left hemisphere 10.4
2686 Male, age 75, right hemisphere 10.4
1787 Male, age 76, left hemisphere 10.3
2764 Male, age 80, right hemisphere 10.3
1938 Female, age 85, left hemisphere 9.9
Hippocampus, CA1
nTPM: 10.4
2082 Female, age 91, right hemisphere 11.1
2527 Male, age 74, both hemispheres 10.9
2045 Male, age 76, both hemispheres 10.5
1873 Female, age 85, both hemispheres 10.2
2749 Male, age 80, left hemisphere 9.5
Hippocampus, CA2
nTPM: 10.4
2113 Female, age 91, right hemisphere 11.1
1963 Male, age 80, left hemisphere 10.6
1940 Female, age 85, left hemisphere 10.5
2437 Female, age 94, left hemisphere 10.3
2249 Male, age 74, both hemispheres 10.2
1892 Male, age 76, both hemispheres 9.8
Hippocampus, CA3
nTPM: 10.3
1891 Female, age 85, both hemispheres 11.1
2436 Male, age 74, both hemispheres 10.6
1867 Male, age 76, both hemispheres 10.2
2861 Female, age 67, both hemispheres 10.1
2137 Male, age 80, left hemisphere 9.9
2620 Female, age 94, left hemisphere 9.8
Parahippocampal cortex
nTPM: 10.5
2692 Male, age 74, both hemispheres 11.3
2532 Female, age 72, left hemisphere 10.9
2018 Male, age 76, both hemispheres 10.7
2250 Female, age 67, right hemisphere 10.7
1850 Male, age 80, both hemispheres 10.4
2622 Female, age 67, right hemisphere 10.4
1990 Female, age 91, right hemisphere 10.3
2693 Female, age 94, both hemispheres 10.3
2245 Female, age 91, both hemispheres 9.9
1933 Female, age 85, both hemispheres 9.7
Perirhinal gyrus
nTPM: 10.2
2521 Female, age 94, right hemisphere 10.9
1847 Female, age 91, left hemisphere 10.3
1841 Female, age 85, right hemisphere 10.0
1794 Male, age 80, right hemisphere 9.9
2848 Male, age 76, right hemisphere 9.9
Subiculum
nTPM: 10.5
2619 Male, age 74, both hemispheres 11.2
2042 Male, age 76, both hemispheres 11.0
2729 Female, age 91, right hemisphere 10.9
1977 Female, age 85, both hemispheres 10.3
1901 Male, age 80, both hemispheres 10.2
2438 Female, age 94, left hemisphere 9.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.7
Samples: 197

Max nTPM: 14.1
Min nTPM: 2.9
Std nTPM: 1.7
Median nTPM: 6.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 14.1
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 12.9
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 12.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 11.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 10.9
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 10.4
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 10.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 10.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 10.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 10.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 9.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.1
FF:10153-102I9 76 years, female 17.7
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.9
Samples: 4

Max nTPM: 3.0
Min nTPM: 2.8
Sample A Female 2.8
Sample B Female 2.8
Sample C Male 2.9
Sample D Male 3.0
Entorhinal cortex
nTPM: 2.7
Samples: 4

Max nTPM: 2.8
Min nTPM: 2.5
Sample A Female 2.5
Sample B Female 2.8
Sample C Male 2.7
Sample D Male 2.7
Subiculum
nTPM: 2.8
Samples: 4

Max nTPM: 3.0
Min nTPM: 2.6
Sample A Female 2.6
Sample B Female 2.9
Sample C Male 3.0
Sample D Male 2.7
Ventral hippocampus
nTPM: 2.7
Samples: 4

Max nTPM: 2.8
Min nTPM: 2.5
Sample A Female 2.5
Sample B Female 2.8
Sample C Male 2.8
Sample D Male 2.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 12.0
Min nTPM: 3.7
Sample A Male 12.0
Sample B Male 9.4
Sample C Female 4.6
Sample D Female 3.7
Hippocampal formation
nTPM: 7.5
Samples: 4

Max nTPM: 13.6
Min nTPM: 3.0
Sample A Male 3.0
Sample B Male 6.9
Sample C Female 13.6
Sample D Female 6.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69288542 Antisense, RP_050407_01_B07, Mouse strain C57BL/6J (56 days, male) 0.2

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