HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.2 nTPM
HPA:17.2 nTPM
GTEx:11.7 nTPM
FANTOM5:122.6 Scaled Tags Per Million
Pig:72.1 nTPM
Mouse:49.2 nTPM
Allen mouse:12.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034757
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.2
Sample id Sample description nTPM
Hippocampus
nTPM: 10.2
1855 Male, age 76, left hemisphere 21.4
2621 Female, age 67, right hemisphere 18.9
2148 Female, age 91, left hemisphere 15.3
1898 Male, age 80, left hemisphere 5.7
1911 Female, age 85, right hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 7.5
2531 Female, age 67, both hemispheres 19.5
1927 Female, age 91, both hemispheres 14.6
2530 Female, age 94, left hemisphere 10.8
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
Entorhinal gyrus
nTPM: 2.0
2764 Male, age 80, right hemisphere 8.9
2613 Female, age 94, left hemisphere 3.3
1787 Male, age 76, left hemisphere 0.0
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 7.4
2749 Male, age 80, left hemisphere 28.4
1873 Female, age 85, both hemispheres 5.1
2045 Male, age 76, both hemispheres 3.6
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
Hippocampus, CA2
nTPM: 2.5
1963 Male, age 80, left hemisphere 15.2
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 13.2
2861 Female, age 67, both hemispheres 40.9
2620 Female, age 94, left hemisphere 24.0
2137 Male, age 80, left hemisphere 14.3
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 8.5
2622 Female, age 67, right hemisphere 29.3
2245 Female, age 91, both hemispheres 25.7
2532 Female, age 72, left hemisphere 15.0
2693 Female, age 94, both hemispheres 12.1
1850 Male, age 80, both hemispheres 3.4
1933 Female, age 85, both hemispheres 0.0
1990 Female, age 91, right hemisphere 0.0
2018 Male, age 76, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 17.2
2521 Female, age 94, right hemisphere 33.4
1794 Male, age 80, right hemisphere 22.1
1847 Female, age 91, left hemisphere 17.7
1841 Female, age 85, right hemisphere 8.4
2848 Male, age 76, right hemisphere 4.6
Subiculum
nTPM: 0.0
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.7
Samples: 197

Max nTPM: 41.1
Min nTPM: 0.8
Std nTPM: 8.1
Median nTPM: 9.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 41.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 36.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 34.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 33.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 30.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 30.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 29.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 29.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 28.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 28.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 27.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 122.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 122.6
FF:10153-102I9 76 years, female 125.0
FF:10169-103B7 60 years, female 120.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 52.7
Samples: 4

Max nTPM: 65.8
Min nTPM: 35.4
Sample A Female 64.0
Sample B Female 65.8
Sample C Male 35.4
Sample D Male 45.4
Entorhinal cortex
nTPM: 72.1
Samples: 4

Max nTPM: 85.8
Min nTPM: 59.9
Sample A Female 85.8
Sample B Female 59.9
Sample C Male 72.6
Sample D Male 70.1
Subiculum
nTPM: 46.7
Samples: 4

Max nTPM: 58.5
Min nTPM: 36.3
Sample A Female 58.5
Sample B Female 36.3
Sample C Male 50.9
Sample D Male 41.0
Ventral hippocampus
nTPM: 56.6
Samples: 4

Max nTPM: 69.9
Min nTPM: 43.3
Sample A Female 58.4
Sample B Female 43.3
Sample C Male 69.9
Sample D Male 54.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.2
Samples: 4

Max nTPM: 73.1
Min nTPM: 38.1
Sample A Male 43.6
Sample B Male 41.9
Sample C Female 38.1
Sample D Female 73.1
Hippocampal formation
nTPM: 40.1
Samples: 4

Max nTPM: 59.0
Min nTPM: 26.3
Sample A Male 26.3
Sample B Male 46.2
Sample C Female 59.0
Sample D Female 29.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.0
73992923 Antisense, RP_051214_03_C01, Mouse strain C57BL/6J (56 days, male) 14.6
69529424 Antisense, RP_050421_04_C06, Mouse strain C57BL/6J (56 days, male) 9.4

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The Human Protein Atlas

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