HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		151.935
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:73.3 nTPM
HPA:73.3 nTPM
GTEx:88.0 nTPM
FANTOM5:288.5 Scaled Tags Per Million
Pig:109.3 nTPM
Mouse:330.6 nTPM
Allen mouse:22.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007656Antibody CAB034931
Glial cells Not detectedMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB034931
Hippocampal formation mean intensity 151.935
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 25.438
Molecular layer of the dentate gyrus 99.154
Granular dentate gyrus 24.475
CA1 - oriens layer 142.002
CA1 - pyramidal layer 44.622
CA1 - radiatum layer 139.721
CA2 - oriens layer 148.242
CA2 - pyramidal layer 73.776
CA2 - radiatum layer 132.040
CA3 - oriens layer 151.935
CA3 - pyramidal layer 36.231
CA3 - radiatum layer 150.832
Stratum lucidum 49.694
Lacunosum moleculare 115.463
Subiculum 128.411

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 73.3
Sample id Sample description nTPM
Hippocampus
nTPM: 49.7
1898 Male, age 80, left hemisphere 70.9
2621 Female, age 67, right hemisphere 65.5
2148 Female, age 91, left hemisphere 51.6
1911 Female, age 85, right hemisphere 44.2
1855 Male, age 76, left hemisphere 37.7
2529 Female, age 94, left hemisphere 28.4
Dentate gyrus
nTPM: 61.0
1927 Female, age 91, both hemispheres 92.7
2531 Female, age 67, both hemispheres 79.7
2528 Male, age 74, both hemispheres 52.1
2530 Female, age 94, left hemisphere 51.3
2246 Female, age 85, both hemispheres 51.1
2010 Male, age 76, both hemispheres 38.9
Entorhinal gyrus
nTPM: 59.5
2613 Female, age 94, left hemisphere 119.0
1938 Female, age 85, left hemisphere 67.1
2764 Male, age 80, right hemisphere 60.0
1787 Male, age 76, left hemisphere 52.1
2686 Male, age 75, right hemisphere 42.8
2117 Female, age 91, right hemisphere 15.9
Hippocampus, CA1
nTPM: 70.9
2749 Male, age 80, left hemisphere 127.4
2527 Male, age 74, both hemispheres 77.0
1873 Female, age 85, both hemispheres 63.6
2045 Male, age 76, both hemispheres 45.4
2082 Female, age 91, right hemisphere 41.3
Hippocampus, CA2
nTPM: 48.6
1963 Male, age 80, left hemisphere 68.4
1892 Male, age 76, both hemispheres 49.6
2249 Male, age 74, both hemispheres 48.5
2113 Female, age 91, right hemisphere 46.6
2437 Female, age 94, left hemisphere 46.5
1940 Female, age 85, left hemisphere 32.2
Hippocampus, CA3
nTPM: 69.7
2137 Male, age 80, left hemisphere 118.2
2620 Female, age 94, left hemisphere 97.7
2861 Female, age 67, both hemispheres 73.7
2436 Male, age 74, both hemispheres 56.5
1867 Male, age 76, both hemispheres 38.0
1891 Female, age 85, both hemispheres 34.1
Parahippocampal cortex
nTPM: 50.4
2245 Female, age 91, both hemispheres 84.0
1990 Female, age 91, right hemisphere 59.8
1850 Male, age 80, both hemispheres 57.5
1933 Female, age 85, both hemispheres 54.6
2693 Female, age 94, both hemispheres 54.6
2250 Female, age 67, right hemisphere 50.9
2622 Female, age 67, right hemisphere 42.2
2692 Male, age 74, both hemispheres 37.6
2532 Female, age 72, left hemisphere 32.6
2018 Male, age 76, both hemispheres 30.1
Perirhinal gyrus
nTPM: 73.3
1847 Female, age 91, left hemisphere 121.8
1794 Male, age 80, right hemisphere 66.7
1841 Female, age 85, right hemisphere 61.1
2521 Female, age 94, right hemisphere 60.6
2848 Male, age 76, right hemisphere 56.1
Subiculum
nTPM: 38.3
1977 Female, age 85, both hemispheres 53.6
1901 Male, age 80, both hemispheres 51.3
2619 Male, age 74, both hemispheres 36.4
2438 Female, age 94, left hemisphere 35.4
2729 Female, age 91, right hemisphere 31.1
2042 Male, age 76, both hemispheres 22.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 88.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 88.0
Samples: 197

Max nTPM: 269.4
Min nTPM: 1.1
Std nTPM: 56.7
Median nTPM: 84.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 269.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 240.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 229.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 217.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 216.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 211.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 200.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 199.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 197.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 194.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 187.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 288.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 288.5
FF:10169-103B7 60 years, female 441.5
FF:10153-102I9 76 years, female 135.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 109.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 106.2
Samples: 4

Max nTPM: 136.0
Min nTPM: 67.3
Sample A Female 135.1
Sample B Female 136.0
Sample C Male 67.3
Sample D Male 86.2
Entorhinal cortex
nTPM: 75.2
Samples: 4

Max nTPM: 84.3
Min nTPM: 62.1
Sample A Female 84.3
Sample B Female 74.3
Sample C Male 79.9
Sample D Male 62.1
Subiculum
nTPM: 80.3
Samples: 4

Max nTPM: 94.5
Min nTPM: 60.6
Sample A Female 94.5
Sample B Female 73.5
Sample C Male 92.4
Sample D Male 60.6
Ventral hippocampus
nTPM: 109.3
Samples: 4

Max nTPM: 141.3
Min nTPM: 74.2
Sample A Female 100.8
Sample B Female 74.2
Sample C Male 120.8
Sample D Male 141.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 330.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 249.9
Samples: 4

Max nTPM: 274.9
Min nTPM: 227.6
Sample A Male 227.6
Sample B Male 228.2
Sample C Female 274.9
Sample D Female 269.0
Hippocampal formation
nTPM: 330.6
Samples: 4

Max nTPM: 342.0
Min nTPM: 308.0
Sample A Male 337.5
Sample B Male 342.0
Sample C Female 335.0
Sample D Female 308.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.4
634465 Antisense, RP_040914_01_B04, Mouse strain C57BL/6J (56 days, male) 23.5
70743867 Antisense, RP_050725_01_G07, Mouse strain C57BL/6J (56 days, male) 21.4

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The Human Protein Atlas

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