HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:14.8 nTPM
HPA:14.8 nTPM
GTEx:14.3 nTPM
FANTOM5:11.7 Scaled Tags Per Million
Pig:9.3 nTPM
Mouse:13.1 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053752Antibody HPA058032
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.8
Sample id Sample description nTPM
Hippocampus
nTPM: 14.2
2621 Female, age 67, right hemisphere 15.0
1898 Male, age 80, left hemisphere 14.8
2148 Female, age 91, left hemisphere 14.5
2529 Female, age 94, left hemisphere 14.2
1855 Male, age 76, left hemisphere 14.0
1911 Female, age 85, right hemisphere 13.0
Dentate gyrus
nTPM: 14.2
1927 Female, age 91, both hemispheres 14.9
2530 Female, age 94, left hemisphere 14.6
2531 Female, age 67, both hemispheres 14.5
2246 Female, age 85, both hemispheres 14.0
2528 Male, age 74, both hemispheres 13.8
2010 Male, age 76, both hemispheres 13.7
Entorhinal gyrus
nTPM: 14.5
2613 Female, age 94, left hemisphere 16.4
2764 Male, age 80, right hemisphere 15.2
1787 Male, age 76, left hemisphere 14.5
1938 Female, age 85, left hemisphere 14.5
2117 Female, age 91, right hemisphere 13.3
2686 Male, age 75, right hemisphere 13.3
Hippocampus, CA1
nTPM: 13.9
2749 Male, age 80, left hemisphere 16.1
2527 Male, age 74, both hemispheres 14.2
1873 Female, age 85, both hemispheres 13.2
2082 Female, age 91, right hemisphere 13.2
2045 Male, age 76, both hemispheres 12.8
Hippocampus, CA2
nTPM: 14.3
1892 Male, age 76, both hemispheres 15.9
1963 Male, age 80, left hemisphere 15.3
2437 Female, age 94, left hemisphere 14.1
1940 Female, age 85, left hemisphere 13.7
2113 Female, age 91, right hemisphere 13.4
2249 Male, age 74, both hemispheres 13.1
Hippocampus, CA3
nTPM: 14.2
2861 Female, age 67, both hemispheres 16.1
2137 Male, age 80, left hemisphere 15.6
2620 Female, age 94, left hemisphere 15.3
1867 Male, age 76, both hemispheres 12.8
1891 Female, age 85, both hemispheres 12.8
2436 Male, age 74, both hemispheres 12.8
Parahippocampal cortex
nTPM: 13.9
2245 Female, age 91, both hemispheres 15.1
2622 Female, age 67, right hemisphere 14.7
2250 Female, age 67, right hemisphere 14.2
2532 Female, age 72, left hemisphere 14.1
1850 Male, age 80, both hemispheres 13.9
1990 Female, age 91, right hemisphere 13.9
2692 Male, age 74, both hemispheres 13.7
1933 Female, age 85, both hemispheres 13.6
2693 Female, age 94, both hemispheres 13.3
2018 Male, age 76, both hemispheres 12.7
Perirhinal gyrus
nTPM: 14.8
1794 Male, age 80, right hemisphere 15.5
2521 Female, age 94, right hemisphere 15.3
1847 Female, age 91, left hemisphere 14.6
2848 Male, age 76, right hemisphere 14.4
1841 Female, age 85, right hemisphere 13.9
Subiculum
nTPM: 13.1
1977 Female, age 85, both hemispheres 14.3
2619 Male, age 74, both hemispheres 13.8
1901 Male, age 80, both hemispheres 13.5
2042 Male, age 76, both hemispheres 12.5
2438 Female, age 94, left hemisphere 12.4
2729 Female, age 91, right hemisphere 12.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.3
Samples: 197

Max nTPM: 39.1
Min nTPM: 4.0
Std nTPM: 4.4
Median nTPM: 14.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 39.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 29.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 27.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 24.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 23.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 23.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 23.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 22.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 21.4
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 21.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.7
FF:10153-102I9 76 years, female 12.9
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 11.6
Min nTPM: 8.1
Sample A Female 11.6
Sample B Female 9.5
Sample C Male 8.1
Sample D Male 8.1
Entorhinal cortex
nTPM: 7.7
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.1
Sample A Female 8.7
Sample B Female 7.7
Sample C Male 7.4
Sample D Male 7.1
Subiculum
nTPM: 7.7
Samples: 4

Max nTPM: 9.1
Min nTPM: 6.9
Sample A Female 9.1
Sample B Female 6.9
Sample C Male 7.4
Sample D Male 7.4
Ventral hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 11.1
Min nTPM: 5.5
Sample A Female 8.7
Sample B Female 5.5
Sample C Male 11.1
Sample D Male 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.2
Samples: 4

Max nTPM: 13.7
Min nTPM: 10.9
Sample A Male 13.7
Sample B Male 12.2
Sample C Female 10.9
Sample D Female 11.8
Hippocampal formation
nTPM: 13.1
Samples: 4

Max nTPM: 14.3
Min nTPM: 11.8
Sample A Male 11.8
Sample B Male 12.6
Sample C Female 13.8
Sample D Female 14.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
69262345 Antisense, RP_050303_02_C03, Mouse strain C57BL/6J (56 days, male) 2.3

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