HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:124.4 nTPM
HPA:124.4 nTPM
GTEx:108.7 nTPM
FANTOM5:252.4 Scaled Tags Per Million
Pig:71.1 nTPM
Mouse:14.4 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044546
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 124.4
Sample id Sample description nTPM
Hippocampus
nTPM: 122.9
2529 Female, age 94, left hemisphere 136.2
1855 Male, age 76, left hemisphere 132.2
1911 Female, age 85, right hemisphere 130.6
2148 Female, age 91, left hemisphere 128.0
1898 Male, age 80, left hemisphere 111.6
2621 Female, age 67, right hemisphere 98.7
Dentate gyrus
nTPM: 99.3
2528 Male, age 74, both hemispheres 121.4
2246 Female, age 85, both hemispheres 120.0
2010 Male, age 76, both hemispheres 107.4
1927 Female, age 91, both hemispheres 97.3
2531 Female, age 67, both hemispheres 75.3
2530 Female, age 94, left hemisphere 74.3
Entorhinal gyrus
nTPM: 106.2
1938 Female, age 85, left hemisphere 123.9
2117 Female, age 91, right hemisphere 123.9
1787 Male, age 76, left hemisphere 117.1
2764 Male, age 80, right hemisphere 95.3
2686 Male, age 75, right hemisphere 89.4
2613 Female, age 94, left hemisphere 87.7
Hippocampus, CA1
nTPM: 124.4
2527 Male, age 74, both hemispheres 157.0
2082 Female, age 91, right hemisphere 133.0
1873 Female, age 85, both hemispheres 131.5
2045 Male, age 76, both hemispheres 114.3
2749 Male, age 80, left hemisphere 86.1
Hippocampus, CA2
nTPM: 106.8
2113 Female, age 91, right hemisphere 143.7
2249 Male, age 74, both hemispheres 133.2
1940 Female, age 85, left hemisphere 108.1
1963 Male, age 80, left hemisphere 92.2
2437 Female, age 94, left hemisphere 84.2
1892 Male, age 76, both hemispheres 79.5
Hippocampus, CA3
nTPM: 100.2
1891 Female, age 85, both hemispheres 127.2
2436 Male, age 74, both hemispheres 125.5
1867 Male, age 76, both hemispheres 92.0
2620 Female, age 94, left hemisphere 88.9
2861 Female, age 67, both hemispheres 87.7
2137 Male, age 80, left hemisphere 79.8
Parahippocampal cortex
nTPM: 115.9
2692 Male, age 74, both hemispheres 143.3
2622 Female, age 67, right hemisphere 132.5
2250 Female, age 67, right hemisphere 126.8
1933 Female, age 85, both hemispheres 122.7
1990 Female, age 91, right hemisphere 115.2
2018 Male, age 76, both hemispheres 113.1
1850 Male, age 80, both hemispheres 110.6
2245 Female, age 91, both hemispheres 108.7
2693 Female, age 94, both hemispheres 101.6
2532 Female, age 72, left hemisphere 84.2
Perirhinal gyrus
nTPM: 109.6
1847 Female, age 91, left hemisphere 131.8
1794 Male, age 80, right hemisphere 112.0
2521 Female, age 94, right hemisphere 110.3
1841 Female, age 85, right hemisphere 104.5
2848 Male, age 76, right hemisphere 89.3
Subiculum
nTPM: 119.6
2619 Male, age 74, both hemispheres 166.3
2729 Female, age 91, right hemisphere 142.6
2438 Female, age 94, left hemisphere 113.3
1977 Female, age 85, both hemispheres 112.4
2042 Male, age 76, both hemispheres 96.3
1901 Male, age 80, both hemispheres 86.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 108.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 108.7
Samples: 197

Max nTPM: 367.0
Min nTPM: 13.8
Std nTPM: 73.6
Median nTPM: 85.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 367.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 347.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 323.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 318.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 305.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 304.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 293.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 291.2
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 280.3
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 278.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 271.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 252.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 252.4
FF:10153-102I9 76 years, female 280.9
FF:10169-103B7 60 years, female 223.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.1
Samples: 4

Max nTPM: 49.0
Min nTPM: 30.1
Sample A Female 42.7
Sample B Female 42.7
Sample C Male 49.0
Sample D Male 30.1
Entorhinal cortex
nTPM: 41.2
Samples: 4

Max nTPM: 46.3
Min nTPM: 36.8
Sample A Female 37.4
Sample B Female 44.2
Sample C Male 46.3
Sample D Male 36.8
Subiculum
nTPM: 71.1
Samples: 4

Max nTPM: 83.8
Min nTPM: 47.7
Sample A Female 75.8
Sample B Female 83.8
Sample C Male 77.0
Sample D Male 47.7
Ventral hippocampus
nTPM: 54.6
Samples: 4

Max nTPM: 69.5
Min nTPM: 37.5
Sample A Female 47.6
Sample B Female 69.5
Sample C Male 63.8
Sample D Male 37.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 22.7
Min nTPM: 10.3
Sample A Male 11.0
Sample B Male 10.3
Sample C Female 22.7
Sample D Female 13.7
Hippocampal formation
nTPM: 11.1
Samples: 4

Max nTPM: 14.6
Min nTPM: 6.0
Sample A Male 11.9
Sample B Male 6.0
Sample C Female 11.8
Sample D Female 14.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
75694250 Antisense, RP_060412_02_F06, Mouse strain C57BL/6J (56 days, male) 0.3
75079777 Antisense, RP_060412_02_F06, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

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