HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:90.1 nTPM
HPA:90.1 nTPM
GTEx:96.0 nTPM
FANTOM5:201.5 Scaled Tags Per Million
Pig:94.7 nTPM
Mouse:73.4 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026907
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 90.1
Sample id Sample description nTPM
Hippocampus
nTPM: 88.3
2529 Female, age 94, left hemisphere 90.5
1898 Male, age 80, left hemisphere 90.4
1855 Male, age 76, left hemisphere 89.3
1911 Female, age 85, right hemisphere 87.5
2621 Female, age 67, right hemisphere 86.6
2148 Female, age 91, left hemisphere 85.2
Dentate gyrus
nTPM: 88.9
2530 Female, age 94, left hemisphere 99.9
2010 Male, age 76, both hemispheres 93.6
1927 Female, age 91, both hemispheres 86.7
2246 Female, age 85, both hemispheres 86.1
2531 Female, age 67, both hemispheres 84.3
2528 Male, age 74, both hemispheres 83.2
Entorhinal gyrus
nTPM: 87.0
2686 Male, age 75, right hemisphere 94.0
1938 Female, age 85, left hemisphere 88.9
2117 Female, age 91, right hemisphere 88.2
1787 Male, age 76, left hemisphere 85.2
2764 Male, age 80, right hemisphere 85.1
2613 Female, age 94, left hemisphere 80.7
Hippocampus, CA1
nTPM: 90.1
2045 Male, age 76, both hemispheres 97.3
2749 Male, age 80, left hemisphere 95.0
1873 Female, age 85, both hemispheres 89.9
2527 Male, age 74, both hemispheres 84.9
2082 Female, age 91, right hemisphere 83.6
Hippocampus, CA2
nTPM: 87.4
1892 Male, age 76, both hemispheres 90.8
1963 Male, age 80, left hemisphere 90.1
2437 Female, age 94, left hemisphere 87.2
2249 Male, age 74, both hemispheres 86.5
2113 Female, age 91, right hemisphere 85.4
1940 Female, age 85, left hemisphere 84.1
Hippocampus, CA3
nTPM: 86.7
2137 Male, age 80, left hemisphere 93.5
1867 Male, age 76, both hemispheres 92.6
1891 Female, age 85, both hemispheres 88.6
2861 Female, age 67, both hemispheres 83.5
2436 Male, age 74, both hemispheres 81.3
2620 Female, age 94, left hemisphere 81.1
Parahippocampal cortex
nTPM: 85.9
2018 Male, age 76, both hemispheres 92.3
1850 Male, age 80, both hemispheres 89.8
2532 Female, age 72, left hemisphere 88.0
2692 Male, age 74, both hemispheres 87.4
1933 Female, age 85, both hemispheres 86.2
2245 Female, age 91, both hemispheres 85.8
1990 Female, age 91, right hemisphere 83.0
2622 Female, age 67, right hemisphere 82.7
2693 Female, age 94, both hemispheres 82.3
2250 Female, age 67, right hemisphere 81.2
Perirhinal gyrus
nTPM: 86.8
1841 Female, age 85, right hemisphere 92.0
2848 Male, age 76, right hemisphere 90.0
1794 Male, age 80, right hemisphere 88.1
1847 Female, age 91, left hemisphere 83.2
2521 Female, age 94, right hemisphere 80.6
Subiculum
nTPM: 88.6
2438 Female, age 94, left hemisphere 93.0
2042 Male, age 76, both hemispheres 91.0
1901 Male, age 80, both hemispheres 89.5
1977 Female, age 85, both hemispheres 87.9
2729 Female, age 91, right hemisphere 87.4
2619 Male, age 74, both hemispheres 82.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 96.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 96.0
Samples: 197

Max nTPM: 260.1
Min nTPM: 55.7
Std nTPM: 32.5
Median nTPM: 88.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 260.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 240.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 227.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 225.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 191.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 189.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 181.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 172.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 169.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 164.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 159.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 201.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 201.5
FF:10169-103B7 60 years, female 219.7
FF:10153-102I9 76 years, female 183.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 94.7
Samples: 4

Max nTPM: 119.8
Min nTPM: 72.4
Sample A Female 119.8
Sample B Female 95.2
Sample C Male 91.5
Sample D Male 72.4
Entorhinal cortex
nTPM: 91.1
Samples: 4

Max nTPM: 118.8
Min nTPM: 72.3
Sample A Female 81.7
Sample B Female 118.8
Sample C Male 91.4
Sample D Male 72.3
Subiculum
nTPM: 92.0
Samples: 4

Max nTPM: 115.8
Min nTPM: 78.7
Sample A Female 115.8
Sample B Female 88.4
Sample C Male 78.7
Sample D Male 85.2
Ventral hippocampus
nTPM: 82.7
Samples: 4

Max nTPM: 88.4
Min nTPM: 75.7
Sample A Female 85.0
Sample B Female 75.7
Sample C Male 81.7
Sample D Male 88.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.4
Samples: 4

Max nTPM: 82.5
Min nTPM: 61.2
Sample A Male 71.7
Sample B Male 82.5
Sample C Female 78.2
Sample D Female 61.2
Hippocampal formation
nTPM: 71.3
Samples: 4

Max nTPM: 83.2
Min nTPM: 63.2
Sample A Male 83.2
Sample B Male 66.7
Sample C Female 63.2
Sample D Female 72.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
67978735 Antisense, RP_040923_01_G04, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.