HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:106.4 nTPM
HPA:106.4 nTPM
GTEx:103.1 nTPM
FANTOM5:143.3 Scaled Tags Per Million
Pig:9.7 nTPM
Mouse:55.0 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035330Antibody CAB003677
Glial cells Not detectedLow
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 106.4
Sample id Sample description nTPM
Hippocampus
nTPM: 106.1
2529 Female, age 94, left hemisphere 108.4
1855 Male, age 76, left hemisphere 108.1
1898 Male, age 80, left hemisphere 107.9
1911 Female, age 85, right hemisphere 106.7
2621 Female, age 67, right hemisphere 105.8
2148 Female, age 91, left hemisphere 99.8
Dentate gyrus
nTPM: 102.3
2010 Male, age 76, both hemispheres 110.3
2528 Male, age 74, both hemispheres 109.4
2246 Female, age 85, both hemispheres 101.3
2530 Female, age 94, left hemisphere 100.2
1927 Female, age 91, both hemispheres 97.1
2531 Female, age 67, both hemispheres 95.6
Entorhinal gyrus
nTPM: 99.7
2117 Female, age 91, right hemisphere 115.2
1938 Female, age 85, left hemisphere 100.9
1787 Male, age 76, left hemisphere 99.3
2764 Male, age 80, right hemisphere 96.7
2686 Male, age 75, right hemisphere 95.6
2613 Female, age 94, left hemisphere 90.8
Hippocampus, CA1
nTPM: 101.8
2527 Male, age 74, both hemispheres 107.4
1873 Female, age 85, both hemispheres 103.4
2045 Male, age 76, both hemispheres 103.0
2082 Female, age 91, right hemisphere 101.6
2749 Male, age 80, left hemisphere 93.9
Hippocampus, CA2
nTPM: 104.9
2249 Male, age 74, both hemispheres 116.1
1940 Female, age 85, left hemisphere 106.5
1963 Male, age 80, left hemisphere 104.1
2113 Female, age 91, right hemisphere 104.1
2437 Female, age 94, left hemisphere 100.9
1892 Male, age 76, both hemispheres 97.9
Hippocampus, CA3
nTPM: 102.6
2436 Male, age 74, both hemispheres 115.9
1867 Male, age 76, both hemispheres 107.7
1891 Female, age 85, both hemispheres 106.1
2137 Male, age 80, left hemisphere 96.1
2861 Female, age 67, both hemispheres 95.1
2620 Female, age 94, left hemisphere 94.5
Parahippocampal cortex
nTPM: 100.4
2018 Male, age 76, both hemispheres 110.8
2250 Female, age 67, right hemisphere 106.1
1990 Female, age 91, right hemisphere 100.9
2692 Male, age 74, both hemispheres 100.7
1850 Male, age 80, both hemispheres 98.9
1933 Female, age 85, both hemispheres 98.6
2245 Female, age 91, both hemispheres 97.6
2532 Female, age 72, left hemisphere 97.5
2693 Female, age 94, both hemispheres 97.0
2622 Female, age 67, right hemisphere 96.0
Perirhinal gyrus
nTPM: 97.6
2521 Female, age 94, right hemisphere 103.1
1841 Female, age 85, right hemisphere 97.6
1847 Female, age 91, left hemisphere 96.4
1794 Male, age 80, right hemisphere 96.0
2848 Male, age 76, right hemisphere 94.9
Subiculum
nTPM: 106.4
2042 Male, age 76, both hemispheres 114.4
2729 Female, age 91, right hemisphere 108.9
2438 Female, age 94, left hemisphere 106.7
2619 Male, age 74, both hemispheres 104.8
1901 Male, age 80, both hemispheres 104.6
1977 Female, age 85, both hemispheres 99.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 103.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 103.1
Samples: 197

Max nTPM: 229.9
Min nTPM: 36.3
Std nTPM: 34.8
Median nTPM: 101.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 229.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 220.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 209.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 192.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 184.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 175.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 169.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 167.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 165.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 161.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 161.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 143.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 143.3
FF:10153-102I9 76 years, female 165.3
FF:10169-103B7 60 years, female 121.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 10.0
Min nTPM: 6.9
Sample A Female 10.0
Sample B Female 7.9
Sample C Male 9.9
Sample D Male 6.9
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 8.1
Min nTPM: 7.1
Sample A Female 7.1
Sample B Female 8.1
Sample C Male 7.8
Sample D Male 7.4
Subiculum
nTPM: 9.1
Samples: 4

Max nTPM: 10.6
Min nTPM: 7.2
Sample A Female 7.2
Sample B Female 9.3
Sample C Male 9.3
Sample D Male 10.6
Ventral hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 11.0
Min nTPM: 8.3
Sample A Female 11.0
Sample B Female 9.2
Sample C Male 10.2
Sample D Male 8.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 55.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.0
Samples: 4

Max nTPM: 56.8
Min nTPM: 52.9
Sample A Male 54.5
Sample B Male 56.8
Sample C Female 55.8
Sample D Female 52.9
Hippocampal formation
nTPM: 52.7
Samples: 4

Max nTPM: 60.0
Min nTPM: 47.6
Sample A Male 53.3
Sample B Male 47.6
Sample C Female 49.7
Sample D Female 60.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
77454635 Antisense, RP_070129_01_B05, Mouse strain C57BL/6J (56 days, male) 2.1
79488933 Antisense, RP_070129_01_B05, Mouse strain C57BL/6J (56 days, male) 1.3

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