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C5orf63
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TISSUE PONS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Tissue proteome
Pons
PONS - Expression summary
Mouse brain, Intensity
Ponsi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

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85.066
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

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No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:445.4 nTPM
HPA:445.4 nTPM
FANTOM5:4.1 Scaled Tags Per Million
Pig:7.6 nTPM
Allen mouse:0.0 Expression energy

PONS - Annotated protein expression
Pending normal tissue analysis

PONS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

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, antibody HPA043240
Pons mean intensity 85.066
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

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FRONT BACK
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus -
Parabrachial nucleus 3.281
Principle sensory trigeminal nucleus 0.193
Locus coeruleus 85.066
Pontine nucleus 2.167
Vestibular nucleus 1.239
Pontine reticular nucleus, oral 0.372
Lateral lemniscus 3.518
Superior paraolivary nucleus 0.062

PONS - HPA Brain RNA-seq
Max nTPM 445.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 434.2
2301 Female, age 85, both hemispheres 529.6
2188 Female, age 91, both hemispheres 438.7
2090 Male, age 80, both hemispheres 385.8
1984 Male, age 76, both hemispheres 382.6
Dorsal cochlear nucleus
nTPM: 386.1
2058 Male, age 76, both hemispheres 398.1
2187 Female, age 91, both hemispheres 395.9
2370 Male, age 61, both hemispheres 391.3
2378 Male, age 80, both hemispheres 378.9
2802 Male, age 74, right hemisphere 366.4
Dorsal tegmental nucleus
nTPM: 421.0
2358 Male, age 61, both hemispheres 515.4
2326 Male, age 74, both hemispheres 401.8
2083 Male, age 80, both hemispheres 384.6
1936 Male, age 76, left hemisphere 382.4
Dorsolateral tegmental area
nTPM: 380.6
2141 Male, age 76, both hemispheres 400.6
2751 Female, age 85, both hemispheres 387.4
2360 Male, age 74, both hemispheres 379.2
2654 Male, age 80, both hemispheres 369.3
2337 Male, age 61, both hemispheres 366.6
Kolliker-Fuse nucleus
nTPM: 409.3
2793 Female, age 91, left hemisphere 465.0
2163 Male, age 80, both hemispheres 382.4
2315 Male, age 76, right hemisphere 380.6
Lateral lemniscal nuclei
nTPM: 445.4
2169 Male, age 76, both hemispheres 504.6
2453 Male, age 74, right hemisphere 503.8
2320 Female, age 91, left hemisphere 444.3
2036 Male, age 80, both hemispheres 390.1
2746 Female, age 85, left hemisphere 384.0
Lateral parabrachial nucleus
nTPM: 380.6
2792 Male, age 76, both hemispheres 411.6
2139 Female, age 85, right hemisphere 375.1
2790 Male, age 61, both hemispheres 368.8
2013 Male, age 80, both hemispheres 367.0
Lateral vestibular nucleus
nTPM: 404.7
2311 Male, age 80, both hemispheres 412.2
2184 Male, age 76, both hemispheres 397.2
Locus coeruleus
nTPM: 388.4
2162 Male, age 80, both hemispheres 415.9
2317 Female, age 72, unknown 396.5
1980 Male, age 76, both hemispheres 392.8
2720 Male, age 74, both hemispheres 388.0
2788 Male, age 74, unknown 384.6
2014 Male, age 55, unknown 375.4
2123 Female, age 91, both hemispheres 365.7
Medial olivary nucleus
nTPM: 372.9
1962 Male, age 76, both hemispheres 388.9
2851 Male, age 80, both hemispheres 381.8
2138 Female, age 91, both hemispheres 364.9
1943 Male, age 61, both hemispheres 356.0
Medial parabrachial nucleus
nTPM: 387.4
2156 Male, age 61, both hemispheres 399.8
2786 Male, age 76, both hemispheres 396.0
2170 Female, age 91, both hemispheres 388.6
2854 Male, age 80, both hemispheres 383.0
2463 Female, age 85, right hemisphere 369.5
Medial periolivary nuclei
nTPM: 411.3
2458 Female, age 91, both hemispheres 460.1
2171 Female, age 85, both hemispheres 429.0
2063 Male, age 76, both hemispheres 414.9
2791 Male, age 74, right hemisphere 376.8
2081 Male, age 80, both hemispheres 375.7
Motor facial nucleus
nTPM: 425.4
2327 Male, age 80, both hemispheres 470.9
2365 Male, age 74, right hemisphere 457.9
2697 Female, age 85, both hemispheres 445.8
2062 Male, age 76, both hemispheres 412.9
2795 Female, age 91, both hemispheres 395.5
2126 Male, age 61, both hemispheres 369.2
Motor trigeminal nucleus
nTPM: 405.4
2335 Male, age 61, both hemispheres 417.5
2321 Female, age 91, both hemispheres 412.8
2309 Male, age 76, both hemispheres 406.7
2079 Male, age 80, both hemispheres 405.7
2560 Male, age 74, both hemispheres 384.6
Nuclei of the trapezoid body
nTPM: 411.2
2368 Female, age 91, both hemispheres 443.9
1983 Male, age 76, both hemispheres 419.6
2735 Female, age 85, both hemispheres 406.4
2166 Male, age 80, both hemispheres 399.8
2159 Male, age 61, both hemispheres 386.2
Paramedian reticular nucleus
nTPM: 379.8
2313 Male, age 61, both hemispheres 388.7
2052 Male, age 76, both hemispheres 379.1
2057 Male, age 80, both hemispheres 377.1
2050 Female, age 85, both hemispheres 374.4
Pontine nuclei
nTPM: 386.3
2319 Female, age 91, both hemispheres 434.6
1968 Male, age 76, left hemisphere 398.7
2454 Male, age 74, left hemisphere 394.8
2787 Female, age 85, both hemispheres 380.3
2115 Male, age 80, left hemisphere 376.8
2109 Female, age 72, unknown 370.7
2727 Male, age 61, right hemisphere 368.8
1863 Male, age 55, unknown 366.0
Pontine raphe nucleus
nTPM: 394.5
2122 Female, age 85, midline 394.9
2853 Male, age 76, midline 394.1
Posteroventral cochlear nucleus
nTPM: 404.1
2135 Female, age 91, both hemispheres 417.5
2341 Male, age 80, both hemispheres 408.3
2752 Female, age 85, both hemispheres 401.6
2070 Male, age 76, both hemispheres 397.3
2371 Male, age 61, both hemispheres 396.1
Principal sensory trigeminal nucleus
nTPM: 409.3
2324 Male, age 76, both hemispheres 432.6
2367 Female, age 91, left hemisphere 426.7
2158 Male, age 61, both hemispheres 402.0
2008 Male, age 80, left hemisphere 375.7
Reticular pontine nucleus, caudal
nTPM: 442.7
2457 Female, age 91, both hemispheres 507.5
2332 Male, age 80, right hemisphere 472.6
2092 Male, age 76, both hemispheres 418.5
2559 Male, age 74, both hemispheres 372.2
Reticular pontine nucleus, oral
nTPM: 425.1
2366 Female, age 91, both hemispheres 574.2
2167 Male, age 76, both hemispheres 409.4
2361 Male, age 74, both hemispheres 394.2
2012 Female, age 85, both hemispheres 374.5
1939 Male, age 80, both hemispheres 373.4
Reticulotegmental nucleus
nTPM: 424.3
2325 Male, age 76, both hemispheres 448.5
2452 Male, age 74, both hemispheres 424.3
2322 Female, age 91, both hemispheres 420.2
2333 Male, age 80, both hemispheres 404.1
Spinal trigeminal nucleus, oral
nTPM: 398.8
1978 Male, age 76, both hemispheres 417.3
2164 Male, age 80, both hemispheres 396.9
2737 Female, age 85, both hemispheres 382.3
Subcoeruleus area
nTPM: 405.3
2451 Male, age 74, both hemispheres 429.4
2089 Male, age 76, left hemisphere 422.2
2323 Female, age 91, left hemisphere 417.9
1958 Male, age 80, both hemispheres 379.4
2369 Female, age 85, left hemisphere 377.6
Superior olive
nTPM: 408.5
2364 Male, age 74, right hemisphere 429.4
2329 Male, age 80, right hemisphere 429.0
2020 Male, age 76, both hemispheres 413.3
2561 Female, age 91, both hemispheres 395.1
1875 Female, age 85, both hemispheres 375.5
Superior vestibular nucleus
nTPM: 380.7
2061 Male, age 76, both hemispheres 393.2
2383 Male, age 74, both hemispheres 376.9
2015 Male, age 80, both hemispheres 372.0
Ventral periolivary nuclei
nTPM: 414.5
2165 Male, age 80, both hemispheres 437.2
2130 Female, age 85, both hemispheres 419.3
2794 Female, age 91, left hemisphere 405.5
2023 Male, age 76, both hemispheres 396.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 415.1
2449 Male, age 74, both hemispheres 471.8
2456 Female, age 91, both hemispheres 412.5
2161 Male, age 80, both hemispheres 407.1
1959 Male, age 76, both hemispheres 405.5
2840 Female, age 85, both hemispheres 400.4
2359 Male, age 61, both hemispheres 393.4

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 4.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 4.1
FF:10182-103D2 60 years, female 4.6
FF:10165-103B3 76 years, female 3.6
Pons
Scaled Tags Per Million: 2.9
FF:10033-101E6 18-54 years, mixed 2.9

PONS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 7.6
Pig sample Sample description nTPM
Pons
nTPM: 7.6
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.0
Sample A Female 7.4
Sample B Female 7.0
Sample C Male 8.7
Sample D Male 7.4

PONS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Pons
Expression energy: 0.0
69530983 Antisense, RP_050426_01_A03, Mouse strain C57BL/6J (56 days, male) 0.0

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