COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:37.9 nTPM
HPA:37.9 nTPM
GTEx:18.0 nTPM
FANTOM5:69.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody CAB025095
Endothelial cells Medium
Glandular cells High
Peripheral nerve/ganglion High



COLON - HPA RNA-seqi
Average nTPM 37.9
overview
Male, age 54 		Colon sample 67
nTPM: 27.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 43.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 48.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 37.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 44.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 25.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 36.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 28.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 34.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 54.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 41.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 33.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 35.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 18.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 12.7
Samples: 373

Max nTPM: 31.6
Min nTPM: 6.6
Std nTPM: 3.4
Median nTPM: 12.1
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 31.6
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 30.8
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 28.5
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 24.7
GTEX-WH7G-1426-SM-4LVMU 40-49 years, male 23.7
GTEX-Y8E4-2326-SM-EAZAZ 40-49 years, male 22.3
GTEX-1AYCT-1926-SM-793AE 50-59 years, male 22.2
GTEX-15G19-2726-SM-6LPKG 60-69 years, male 21.2
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 20.7
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 20.3
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 20.2
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Colon - Transverse
Average nTPM: 18.0
Samples: 406

Max nTPM: 51.3
Min nTPM: 6.2
Std nTPM: 7.1
Median nTPM: 15.8
GTEX-1B8KZ-1326-SM-7DUG6 50-59 years, male 51.3
GTEX-1H1E6-1926-SM-9OSWD 30-39 years, male 42.1
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 41.7
GTEX-1B8KE-1926-SM-731EE 50-59 years, male 39.7
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 38.2
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 38.1
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 36.1
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 35.9
GTEX-1LG7Z-1426-SM-CXKYV 30-39 years, male 35.6
GTEX-WHSB-0926-SM-4M1XJ 50-59 years, male 34.1
GTEX-1KANC-0926-SM-D3LA9 50-59 years, female 34.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 69.5
FF:10014-101C5 62,83,84 years, mixed 69.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.