HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.4 nTPM
HPA:17.4 nTPM
GTEx:24.6 nTPM
FANTOM5:62.6 Scaled Tags Per Million
Pig:53.4 nTPM
Mouse:48.7 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043487
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.4
Sample id Sample description nTPM
Hippocampus
nTPM: 17.3
1898 Male, age 80, left hemisphere 18.6
1855 Male, age 76, left hemisphere 18.4
1911 Female, age 85, right hemisphere 17.4
2529 Female, age 94, left hemisphere 16.8
2148 Female, age 91, left hemisphere 16.2
2621 Female, age 67, right hemisphere 16.2
Dentate gyrus
nTPM: 17.4
2530 Female, age 94, left hemisphere 18.5
2010 Male, age 76, both hemispheres 18.1
1927 Female, age 91, both hemispheres 18.0
2246 Female, age 85, both hemispheres 16.8
2531 Female, age 67, both hemispheres 16.8
2528 Male, age 74, both hemispheres 16.4
Entorhinal gyrus
nTPM: 16.1
2686 Male, age 75, right hemisphere 17.8
1938 Female, age 85, left hemisphere 17.2
2117 Female, age 91, right hemisphere 16.3
1787 Male, age 76, left hemisphere 16.2
2764 Male, age 80, right hemisphere 15.7
2613 Female, age 94, left hemisphere 13.7
Hippocampus, CA1
nTPM: 16.9
2045 Male, age 76, both hemispheres 18.8
1873 Female, age 85, both hemispheres 17.8
2749 Male, age 80, left hemisphere 17.2
2527 Male, age 74, both hemispheres 15.6
2082 Female, age 91, right hemisphere 15.2
Hippocampus, CA2
nTPM: 16.3
1892 Male, age 76, both hemispheres 18.1
1940 Female, age 85, left hemisphere 16.7
2437 Female, age 94, left hemisphere 16.5
2249 Male, age 74, both hemispheres 16.2
1963 Male, age 80, left hemisphere 15.8
2113 Female, age 91, right hemisphere 14.5
Hippocampus, CA3
nTPM: 16.5
1867 Male, age 76, both hemispheres 18.9
1891 Female, age 85, both hemispheres 17.1
2137 Male, age 80, left hemisphere 16.0
2861 Female, age 67, both hemispheres 15.9
2620 Female, age 94, left hemisphere 15.7
2436 Male, age 74, both hemispheres 15.3
Parahippocampal cortex
nTPM: 16.3
1850 Male, age 80, both hemispheres 17.8
2018 Male, age 76, both hemispheres 17.8
2532 Female, age 72, left hemisphere 16.8
2250 Female, age 67, right hemisphere 16.5
2693 Female, age 94, both hemispheres 16.5
1933 Female, age 85, both hemispheres 16.0
1990 Female, age 91, right hemisphere 15.8
2692 Male, age 74, both hemispheres 15.7
2245 Female, age 91, both hemispheres 15.2
2622 Female, age 67, right hemisphere 15.0
Perirhinal gyrus
nTPM: 17.3
1841 Female, age 85, right hemisphere 18.6
1847 Female, age 91, left hemisphere 17.4
2848 Male, age 76, right hemisphere 17.4
2521 Female, age 94, right hemisphere 16.7
1794 Male, age 80, right hemisphere 16.3
Subiculum
nTPM: 17.0
2438 Female, age 94, left hemisphere 20.3
2042 Male, age 76, both hemispheres 17.2
1901 Male, age 80, both hemispheres 17.0
1977 Female, age 85, both hemispheres 16.5
2729 Female, age 91, right hemisphere 16.1
2619 Male, age 74, both hemispheres 14.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.6
Samples: 197

Max nTPM: 82.5
Min nTPM: 12.0
Std nTPM: 7.9
Median nTPM: 23.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 82.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 57.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 48.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 43.5
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 42.4
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 41.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 40.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 40.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 39.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 38.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 37.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.6
FF:10169-103B7 60 years, female 82.6
FF:10153-102I9 76 years, female 42.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 53.4
Samples: 4

Max nTPM: 67.6
Min nTPM: 40.2
Sample A Female 67.6
Sample B Female 51.4
Sample C Male 54.4
Sample D Male 40.2
Entorhinal cortex
nTPM: 42.5
Samples: 4

Max nTPM: 47.1
Min nTPM: 34.7
Sample A Female 42.8
Sample B Female 47.1
Sample C Male 45.2
Sample D Male 34.7
Subiculum
nTPM: 43.7
Samples: 4

Max nTPM: 58.0
Min nTPM: 33.5
Sample A Female 58.0
Sample B Female 39.3
Sample C Male 33.5
Sample D Male 43.8
Ventral hippocampus
nTPM: 42.4
Samples: 4

Max nTPM: 50.5
Min nTPM: 34.0
Sample A Female 45.4
Sample B Female 34.0
Sample C Male 39.6
Sample D Male 50.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.4
Samples: 4

Max nTPM: 42.8
Min nTPM: 35.4
Sample A Male 41.2
Sample B Male 42.2
Sample C Female 42.8
Sample D Female 35.4
Hippocampal formation
nTPM: 48.7
Samples: 4

Max nTPM: 56.6
Min nTPM: 42.9
Sample A Male 56.6
Sample B Male 47.2
Sample C Female 48.0
Sample D Female 42.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
69443487 Antisense, RP_050414_04_B10, Mouse strain C57BL/6J (56 days, male) 9.3
70723032 Antisense, RP_050630_03_H09, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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