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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:286.6 nTPM
HPA:286.6 nTPM
GTEx:275.5 nTPM
FANTOM5:120.0 Scaled Tags Per Million
Pig:120.4 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 286.6
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 284.4
1981 Female, age 72, midline 307.7
2048 Male, age 55, midline 283.2
2565 Male, age 75, midline 283.1
2194 Female, age 79, both hemispheres 280.4
2816 Male, age 47, midline 267.6
Cervical spinal cord, dorsal horn
nTPM: 286.6
2173 Female, age 72, unknown 318.9
2069 Male, age 47, both hemispheres 298.0
2296 Male, age 66, both hemispheres 291.8
1877 Male, age 55, unknown 275.6
2297 Male, age 75, both hemispheres 270.9
2721 Male, age 90, both hemispheres 264.4
Cervical spinal cord, ventral horn
nTPM: 283.5
2098 Female, age 72, unknown 302.0
2480 Male, age 75, both hemispheres 289.5
2809 Male, age 90, both hemispheres 285.3
2068 Male, age 55, unknown 280.6
2295 Male, age 66, both hemispheres 276.8
2820 Female, age 79, both hemispheres 267.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 275.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 275.5
Samples: 159

Max nTPM: 556.7
Min nTPM: 79.1
Std nTPM: 71.2
Median nTPM: 262.4
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 556.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 518.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 453.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 451.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 447.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 421.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 407.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 405.3
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 405.1
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 392.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 390.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 385.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 381.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 379.5
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 367.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 367.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 362.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 362.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 352.6
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 352.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 350.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 349.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 339.7
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 338.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 338.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 338.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 335.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 334.7
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 333.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 333.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 331.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 331.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 330.0
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 329.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 327.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 327.2
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 327.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 323.1
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 322.0
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 318.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 315.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 315.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 313.8
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 309.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 308.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 307.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 306.9
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 304.5
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 304.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 303.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 300.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 298.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 297.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 296.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 296.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 294.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 291.9
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 291.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 291.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 289.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 285.9
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 285.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 283.8
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 283.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 282.9
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 278.5
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 276.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 276.1
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 275.3
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 274.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 274.2
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 272.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 271.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 271.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 270.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 268.9
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 267.1
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 263.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 262.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 262.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 262.0
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 261.8
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 261.4
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 261.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 260.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 259.9
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 258.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 256.6
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 255.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 255.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 253.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 253.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 252.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 252.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 251.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 251.6
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 251.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 248.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 247.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 245.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 245.7
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 243.2
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 241.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 239.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 239.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 239.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 238.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 236.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 232.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 232.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 232.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 229.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 229.2
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 228.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 227.8
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 227.0
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 226.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 225.6
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 225.0
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 224.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 224.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 222.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 222.2
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 221.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 221.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 221.1
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 218.8
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 217.8
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 217.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 217.0
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 216.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 216.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 213.9
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 210.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 209.2
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 207.9
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 206.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 205.1
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 204.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 203.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 202.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 201.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 201.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 199.8
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 198.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 197.8
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 197.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 195.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 192.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 188.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 188.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 187.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 182.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 182.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 177.0
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 158.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 137.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 130.7
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 79.1
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 120.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 120.0
FF:10181-103D1 60 years, female 157.4
FF:10159-103A6 76 years, female 82.6

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 120.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 102.1
Samples: 4

Max nTPM: 113.4
Min nTPM: 93.8
Sample A Female 106.1
Sample B Female 94.9
Sample C Male 113.4
Sample D Male 93.8
Ventral spinal cord
nTPM: 120.4
Samples: 4

Max nTPM: 130.8
Min nTPM: 109.2
Sample A Female 113.9
Sample B Female 127.5
Sample C Male 130.8
Sample D Male 109.2

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