HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:26.0 nTPM
HPA:26.0 nTPM
GTEx:20.6 nTPM
FANTOM5:11.3 Scaled Tags Per Million
Pig:16.8 nTPM
Mouse:19.5 nTPM
Allen mouse:14.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.0
Sample id Sample description nTPM
Hippocampus
nTPM: 24.2
1911 Female, age 85, right hemisphere 25.0
1855 Male, age 76, left hemisphere 24.9
1898 Male, age 80, left hemisphere 24.7
2148 Female, age 91, left hemisphere 23.8
2621 Female, age 67, right hemisphere 23.5
2529 Female, age 94, left hemisphere 23.4
Dentate gyrus
nTPM: 24.3
1927 Female, age 91, both hemispheres 25.8
2246 Female, age 85, both hemispheres 24.4
2010 Male, age 76, both hemispheres 24.2
2531 Female, age 67, both hemispheres 24.0
2530 Female, age 94, left hemisphere 23.7
2528 Male, age 74, both hemispheres 23.5
Entorhinal gyrus
nTPM: 24.3
1787 Male, age 76, left hemisphere 25.9
1938 Female, age 85, left hemisphere 25.7
2613 Female, age 94, left hemisphere 24.2
2117 Female, age 91, right hemisphere 23.6
2764 Male, age 80, right hemisphere 23.3
2686 Male, age 75, right hemisphere 23.2
Hippocampus, CA1
nTPM: 24.4
2749 Male, age 80, left hemisphere 25.0
1873 Female, age 85, both hemispheres 24.8
2045 Male, age 76, both hemispheres 24.8
2527 Male, age 74, both hemispheres 24.0
2082 Female, age 91, right hemisphere 23.4
Hippocampus, CA2
nTPM: 24.4
1892 Male, age 76, both hemispheres 26.3
1940 Female, age 85, left hemisphere 24.4
2249 Male, age 74, both hemispheres 24.2
2437 Female, age 94, left hemisphere 24.0
1963 Male, age 80, left hemisphere 23.9
2113 Female, age 91, right hemisphere 23.7
Hippocampus, CA3
nTPM: 24.7
2137 Male, age 80, left hemisphere 25.6
2436 Male, age 74, both hemispheres 25.6
2620 Female, age 94, left hemisphere 24.7
1867 Male, age 76, both hemispheres 24.6
1891 Female, age 85, both hemispheres 24.5
2861 Female, age 67, both hemispheres 23.1
Parahippocampal cortex
nTPM: 24.9
1933 Female, age 85, both hemispheres 26.6
2693 Female, age 94, both hemispheres 26.3
1850 Male, age 80, both hemispheres 25.9
2250 Female, age 67, right hemisphere 25.5
1990 Female, age 91, right hemisphere 25.0
2532 Female, age 72, left hemisphere 25.0
2018 Male, age 76, both hemispheres 24.7
2245 Female, age 91, both hemispheres 24.2
2692 Male, age 74, both hemispheres 23.5
2622 Female, age 67, right hemisphere 22.5
Perirhinal gyrus
nTPM: 26.0
1841 Female, age 85, right hemisphere 27.1
2848 Male, age 76, right hemisphere 26.1
1847 Female, age 91, left hemisphere 25.9
2521 Female, age 94, right hemisphere 25.6
1794 Male, age 80, right hemisphere 25.2
Subiculum
nTPM: 23.8
1977 Female, age 85, both hemispheres 24.6
1901 Male, age 80, both hemispheres 24.4
2729 Female, age 91, right hemisphere 24.0
2438 Female, age 94, left hemisphere 23.5
2042 Male, age 76, both hemispheres 23.1
2619 Male, age 74, both hemispheres 22.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.6
Samples: 197

Max nTPM: 38.6
Min nTPM: 8.7
Std nTPM: 5.1
Median nTPM: 20.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 38.6
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 35.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 35.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 34.3
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 32.4
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 32.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 31.5
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 30.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 30.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 29.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 29.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.3
FF:10169-103B7 60 years, female 12.5
FF:10153-102I9 76 years, female 10.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 16.2
Min nTPM: 14.5
Sample A Female 15.8
Sample B Female 16.2
Sample C Male 15.5
Sample D Male 14.5
Entorhinal cortex
nTPM: 16.9
Samples: 4

Max nTPM: 18.4
Min nTPM: 15.7
Sample A Female 16.2
Sample B Female 18.4
Sample C Male 17.2
Sample D Male 15.7
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.8
Sample A Female 15.9
Sample B Female 14.8
Sample C Male 16.2
Sample D Male 18.0
Ventral hippocampus
nTPM: 15.0
Samples: 4

Max nTPM: 16.0
Min nTPM: 12.7
Sample A Female 16.0
Sample B Female 16.0
Sample C Male 12.7
Sample D Male 15.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 20.6
Min nTPM: 13.5
Sample A Male 16.0
Sample B Male 20.6
Sample C Female 16.8
Sample D Female 13.5
Hippocampal formation
nTPM: 19.6
Samples: 4

Max nTPM: 22.9
Min nTPM: 17.3
Sample A Male 22.9
Sample B Male 19.0
Sample C Female 17.3
Sample D Female 19.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.6
2606 Antisense, RP_040420_01_F02, Mouse strain C57BL/6J (56 days, male) 14.6
2605 Antisense, RP_040420_01_F02, Mouse strain C57BL/6J (56 days, male) 9.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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