HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.3 nTPM
HPA:13.3 nTPM
GTEx:15.3 nTPM
FANTOM5:74.4 Scaled Tags Per Million
Pig:44.2 nTPM
Mouse:47.5 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019543Antibody HPA063745
Glial cells Not detectedLow
Neuronal cells HighNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.3
Sample id Sample description nTPM
Hippocampus
nTPM: 11.4
1898 Male, age 80, left hemisphere 11.9
2621 Female, age 67, right hemisphere 11.8
1911 Female, age 85, right hemisphere 11.7
2148 Female, age 91, left hemisphere 11.3
1855 Male, age 76, left hemisphere 11.2
2529 Female, age 94, left hemisphere 10.2
Dentate gyrus
nTPM: 11.9
2010 Male, age 76, both hemispheres 13.5
1927 Female, age 91, both hemispheres 13.0
2246 Female, age 85, both hemispheres 11.7
2528 Male, age 74, both hemispheres 11.6
2530 Female, age 94, left hemisphere 10.9
2531 Female, age 67, both hemispheres 10.6
Entorhinal gyrus
nTPM: 10.8
1938 Female, age 85, left hemisphere 12.3
2764 Male, age 80, right hemisphere 11.8
1787 Male, age 76, left hemisphere 11.3
2117 Female, age 91, right hemisphere 10.5
2613 Female, age 94, left hemisphere 10.2
2686 Male, age 75, right hemisphere 8.9
Hippocampus, CA1
nTPM: 12.1
2749 Male, age 80, left hemisphere 15.5
2045 Male, age 76, both hemispheres 12.0
2527 Male, age 74, both hemispheres 11.8
1873 Female, age 85, both hemispheres 11.4
2082 Female, age 91, right hemisphere 9.8
Hippocampus, CA2
nTPM: 11.7
1963 Male, age 80, left hemisphere 13.3
2249 Male, age 74, both hemispheres 12.8
1892 Male, age 76, both hemispheres 12.4
2437 Female, age 94, left hemisphere 11.2
1940 Female, age 85, left hemisphere 10.9
2113 Female, age 91, right hemisphere 9.5
Hippocampus, CA3
nTPM: 11.3
2436 Male, age 74, both hemispheres 14.4
2137 Male, age 80, left hemisphere 12.7
1867 Male, age 76, both hemispheres 11.8
1891 Female, age 85, both hemispheres 11.0
2861 Female, age 67, both hemispheres 9.7
2620 Female, age 94, left hemisphere 8.5
Parahippocampal cortex
nTPM: 12.0
1850 Male, age 80, both hemispheres 13.9
2693 Female, age 94, both hemispheres 13.3
1933 Female, age 85, both hemispheres 12.9
1990 Female, age 91, right hemisphere 12.6
2532 Female, age 72, left hemisphere 12.1
2250 Female, age 67, right hemisphere 12.0
2018 Male, age 76, both hemispheres 11.7
2245 Female, age 91, both hemispheres 11.3
2692 Male, age 74, both hemispheres 11.0
2622 Female, age 67, right hemisphere 9.7
Perirhinal gyrus
nTPM: 13.3
1847 Female, age 91, left hemisphere 14.4
1794 Male, age 80, right hemisphere 13.5
1841 Female, age 85, right hemisphere 13.5
2848 Male, age 76, right hemisphere 12.7
2521 Female, age 94, right hemisphere 12.6
Subiculum
nTPM: 11.2
2438 Female, age 94, left hemisphere 15.9
1977 Female, age 85, both hemispheres 12.1
1901 Male, age 80, both hemispheres 11.1
2619 Male, age 74, both hemispheres 10.0
2729 Female, age 91, right hemisphere 9.9
2042 Male, age 76, both hemispheres 8.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.3
Samples: 197

Max nTPM: 25.9
Min nTPM: 7.8
Std nTPM: 3.3
Median nTPM: 15.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 25.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 24.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 23.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 23.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 22.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 22.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 21.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 21.7
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 21.5
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 21.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 21.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.4
FF:10169-103B7 60 years, female 80.5
FF:10153-102I9 76 years, female 68.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.9
Samples: 4

Max nTPM: 48.4
Min nTPM: 34.1
Sample A Female 48.4
Sample B Female 36.9
Sample C Male 34.1
Sample D Male 36.3
Entorhinal cortex
nTPM: 43.2
Samples: 4

Max nTPM: 48.9
Min nTPM: 37.8
Sample A Female 48.9
Sample B Female 42.8
Sample C Male 43.1
Sample D Male 37.8
Subiculum
nTPM: 44.2
Samples: 4

Max nTPM: 61.3
Min nTPM: 35.0
Sample A Female 61.3
Sample B Female 40.2
Sample C Male 40.2
Sample D Male 35.0
Ventral hippocampus
nTPM: 40.6
Samples: 4

Max nTPM: 48.3
Min nTPM: 34.8
Sample A Female 48.3
Sample B Female 34.8
Sample C Male 42.9
Sample D Male 36.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.6
Samples: 4

Max nTPM: 49.7
Min nTPM: 46.5
Sample A Male 47.2
Sample B Male 46.8
Sample C Female 46.5
Sample D Female 49.7
Hippocampal formation
nTPM: 43.0
Samples: 4

Max nTPM: 50.4
Min nTPM: 38.6
Sample A Male 50.4
Sample B Male 43.0
Sample C Female 39.8
Sample D Female 38.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
100146066 Antisense, RP_110421_02_F10, Mouse strain C57BL/6J (56 days, male) 0.3

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